Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
SCN4BQ8IWT1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
SCN4BQ8IWT1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SCN4BQ8IWT1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
SCN4BQ8IWT1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.19■■□□□ 1.78
SCN4BQ8IWT1 WHAMMP3-201ENST00000611636 1609 ntBASIC26.18■■□□□ 1.78
SCN4BQ8IWT1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
SCN4BQ8IWT1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SCN4BQ8IWT1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SCN4BQ8IWT1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.18■■□□□ 1.78
SCN4BQ8IWT1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SCN4BQ8IWT1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
SCN4BQ8IWT1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
SCN4BQ8IWT1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCN4BQ8IWT1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SCN4BQ8IWT1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.17■■□□□ 1.78
SCN4BQ8IWT1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCN4BQ8IWT1 AC007029.1-201ENST00000604183 313 ntBASIC26.17■■□□□ 1.78
SCN4BQ8IWT1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
SCN4BQ8IWT1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCN4BQ8IWT1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.16■■□□□ 1.78
SCN4BQ8IWT1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.16■■□□□ 1.78
SCN4BQ8IWT1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.15■■□□□ 1.78
SCN4BQ8IWT1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCN4BQ8IWT1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.15■■□□□ 1.78
SCN4BQ8IWT1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SCN4BQ8IWT1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SCN4BQ8IWT1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
SCN4BQ8IWT1 LINC01003-201ENST00000564834 1764 ntBASIC26.15■■□□□ 1.78
SCN4BQ8IWT1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.14■■□□□ 1.78
SCN4BQ8IWT1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
SCN4BQ8IWT1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SCN4BQ8IWT1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SCN4BQ8IWT1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
SCN4BQ8IWT1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.13■■□□□ 1.77
SCN4BQ8IWT1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SCN4BQ8IWT1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SCN4BQ8IWT1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SCN4BQ8IWT1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.12■■□□□ 1.77
SCN4BQ8IWT1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
SCN4BQ8IWT1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SCN4BQ8IWT1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.11■■□□□ 1.77
SCN4BQ8IWT1 AC025884.2-201ENST00000553429 711 ntBASIC26.11■■□□□ 1.77
SCN4BQ8IWT1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SCN4BQ8IWT1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SCN4BQ8IWT1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SCN4BQ8IWT1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.1■■□□□ 1.77
SCN4BQ8IWT1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SCN4BQ8IWT1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SCN4BQ8IWT1 AC012354.3-201ENST00000623734 483 ntBASIC26.09■■□□□ 1.77
SCN4BQ8IWT1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
SCN4BQ8IWT1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SCN4BQ8IWT1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.09■■□□□ 1.77
SCN4BQ8IWT1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SCN4BQ8IWT1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SCN4BQ8IWT1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SCN4BQ8IWT1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.08■■□□□ 1.77
SCN4BQ8IWT1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
SCN4BQ8IWT1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SCN4BQ8IWT1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SCN4BQ8IWT1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
SCN4BQ8IWT1 AL359504.2-201ENST00000605506 1601 ntBASIC26.07■■□□□ 1.76
SCN4BQ8IWT1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SCN4BQ8IWT1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.07■■□□□ 1.76
SCN4BQ8IWT1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
SCN4BQ8IWT1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
SCN4BQ8IWT1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.06■■□□□ 1.76
SCN4BQ8IWT1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.05■■□□□ 1.76
SCN4BQ8IWT1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.05■■□□□ 1.76
SCN4BQ8IWT1 KRT18P60-201ENST00000312876 1297 ntBASIC26.05■■□□□ 1.76
SCN4BQ8IWT1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SCN4BQ8IWT1 AC133552.2-201ENST00000619106 1032 ntBASIC26.05■■□□□ 1.76
SCN4BQ8IWT1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.05■■□□□ 1.76
SCN4BQ8IWT1 AC142086.6-201ENST00000621154 1765 ntBASIC26.05■■□□□ 1.76
SCN4BQ8IWT1 AC009831.1-201ENST00000580420 1582 ntBASIC26.04■■□□□ 1.76
SCN4BQ8IWT1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SCN4BQ8IWT1 RP9P-202ENST00000450133 1212 ntBASIC26.04■■□□□ 1.76
SCN4BQ8IWT1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
SCN4BQ8IWT1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
SCN4BQ8IWT1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
SCN4BQ8IWT1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.03■■□□□ 1.76
SCN4BQ8IWT1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.03■■□□□ 1.76
SCN4BQ8IWT1 BX255925.1-201ENST00000566954 1854 ntBASIC26.03■■□□□ 1.76
SCN4BQ8IWT1 AC093536.1-201ENST00000569153 554 ntBASIC26.03■■□□□ 1.76
SCN4BQ8IWT1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
SCN4BQ8IWT1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SCN4BQ8IWT1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
SCN4BQ8IWT1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.02■■□□□ 1.76
SCN4BQ8IWT1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
SCN4BQ8IWT1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SCN4BQ8IWT1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.02■■□□□ 1.76
SCN4BQ8IWT1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
SCN4BQ8IWT1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SCN4BQ8IWT1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SCN4BQ8IWT1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
SCN4BQ8IWT1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.01■■□□□ 1.75
SCN4BQ8IWT1 MIR3960-201ENST00000583311 91 ntBASIC26.01■■□□□ 1.75
SCN4BQ8IWT1 AC026202.3-201ENST00000600805 1127 ntBASIC26.01■■□□□ 1.75
SCN4BQ8IWT1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SCN4BQ8IWT1 AL449106.1-201ENST00000608517 1980 ntBASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms