Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.91■■■□□ 2.7
COL23A1Q86Y22 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
COL23A1Q86Y22 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
COL23A1Q86Y22 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC31.9■■■□□ 2.7
COL23A1Q86Y22 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.9■■■□□ 2.7
COL23A1Q86Y22 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.9■■■□□ 2.7
COL23A1Q86Y22 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC31.9■■■□□ 2.7
COL23A1Q86Y22 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
COL23A1Q86Y22 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC31.89■■■□□ 2.7
COL23A1Q86Y22 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.89■■■□□ 2.7
COL23A1Q86Y22 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
COL23A1Q86Y22 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
COL23A1Q86Y22 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.88■■■□□ 2.69
COL23A1Q86Y22 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
COL23A1Q86Y22 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
COL23A1Q86Y22 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.88■■■□□ 2.69
COL23A1Q86Y22 AC018755.3-202ENST00000596210 929 ntBASIC31.87■■■□□ 2.69
COL23A1Q86Y22 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
COL23A1Q86Y22 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.86■■■□□ 2.69
COL23A1Q86Y22 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.86■■■□□ 2.69
COL23A1Q86Y22 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
COL23A1Q86Y22 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
COL23A1Q86Y22 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC31.85■■■□□ 2.69
COL23A1Q86Y22 AL031848.2-201ENST00000607670 837 ntBASIC31.85■■■□□ 2.69
COL23A1Q86Y22 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
COL23A1Q86Y22 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
COL23A1Q86Y22 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
COL23A1Q86Y22 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
COL23A1Q86Y22 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
COL23A1Q86Y22 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
COL23A1Q86Y22 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
COL23A1Q86Y22 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
COL23A1Q86Y22 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.82■■■□□ 2.68
COL23A1Q86Y22 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC31.82■■■□□ 2.68
COL23A1Q86Y22 MIR3960-201ENST00000583311 91 ntBASIC31.82■■■□□ 2.68
COL23A1Q86Y22 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
COL23A1Q86Y22 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
COL23A1Q86Y22 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC31.81■■■□□ 2.68
COL23A1Q86Y22 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
COL23A1Q86Y22 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
COL23A1Q86Y22 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
COL23A1Q86Y22 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.8■■■□□ 2.68
COL23A1Q86Y22 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
COL23A1Q86Y22 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
COL23A1Q86Y22 LSM7-203ENST00000585409 512 ntTSL 2 BASIC31.79■■■□□ 2.68
COL23A1Q86Y22 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.78■■■□□ 2.68
COL23A1Q86Y22 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.78■■■□□ 2.68
COL23A1Q86Y22 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
COL23A1Q86Y22 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
COL23A1Q86Y22 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
COL23A1Q86Y22 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC31.77■■■□□ 2.68
COL23A1Q86Y22 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
COL23A1Q86Y22 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
COL23A1Q86Y22 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
COL23A1Q86Y22 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
COL23A1Q86Y22 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC31.75■■■□□ 2.67
COL23A1Q86Y22 AC239859.2-201ENST00000444165 318 ntBASIC31.75■■■□□ 2.67
COL23A1Q86Y22 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
COL23A1Q86Y22 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
COL23A1Q86Y22 AC100797.4-201ENST00000631653 1827 ntBASIC31.75■■■□□ 2.67
COL23A1Q86Y22 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
COL23A1Q86Y22 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
COL23A1Q86Y22 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.73■■■□□ 2.67
COL23A1Q86Y22 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC31.73■■■□□ 2.67
COL23A1Q86Y22 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
COL23A1Q86Y22 RNF146-205ENST00000477776 762 ntTSL 3 BASIC31.72■■■□□ 2.67
COL23A1Q86Y22 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
COL23A1Q86Y22 AC008406.3-201ENST00000620001 1374 ntBASIC31.71■■■□□ 2.67
COL23A1Q86Y22 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.71■■■□□ 2.67
COL23A1Q86Y22 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
COL23A1Q86Y22 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
COL23A1Q86Y22 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.71■■■□□ 2.67
COL23A1Q86Y22 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
COL23A1Q86Y22 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
COL23A1Q86Y22 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.71■■■□□ 2.67
COL23A1Q86Y22 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
COL23A1Q86Y22 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
COL23A1Q86Y22 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
COL23A1Q86Y22 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.67■■■□□ 2.66
COL23A1Q86Y22 AP004833.2-201ENST00000532228 1454 ntBASIC31.66■■■□□ 2.66
COL23A1Q86Y22 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.66■■■□□ 2.66
COL23A1Q86Y22 CREM-229ENST00000474362 1030 ntTSL 2 BASIC31.65■■■□□ 2.66
COL23A1Q86Y22 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC31.65■■■□□ 2.66
COL23A1Q86Y22 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
COL23A1Q86Y22 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.65■■■□□ 2.66
COL23A1Q86Y22 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.64■■■□□ 2.66
COL23A1Q86Y22 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.63■■■□□ 2.65
COL23A1Q86Y22 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC31.63■■■□□ 2.65
COL23A1Q86Y22 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL23A1Q86Y22 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL23A1Q86Y22 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
COL23A1Q86Y22 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL23A1Q86Y22 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
COL23A1Q86Y22 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC31.62■■■□□ 2.65
COL23A1Q86Y22 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
COL23A1Q86Y22 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
COL23A1Q86Y22 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.61■■■□□ 2.65
COL23A1Q86Y22 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC31.61■■■□□ 2.65
COL23A1Q86Y22 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
COL23A1Q86Y22 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms