Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 SLC38A5-208ENST00000494034 525 ntTSL 519.97■□□□□ 0.791e-6■■■■□ 23.9
PABPN1Q86U42 NBEAL2-201ENST00000416683 6364 ntTSL 1 (best)21.96■■□□□ 1.117e-7■■■■□ 23.9
PABPN1Q86U42 NBEAL2-204ENST00000443829 3508 ntTSL 1 (best)21.12■□□□□ 0.977e-7■■■■□ 23.9
PABPN1Q86U42 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.887e-7■■■■□ 23.9
PABPN1Q86U42 HARS-211ENST00000509087 619 ntTSL 218.96■□□□□ 0.632e-7■■■■□ 23.9
PABPN1Q86U42 AAAS-216ENST00000550033 900 ntTSL 333.31■■■□□ 2.923e-8■■■■□ 23.9
PABPN1Q86U42 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC31.08■■■□□ 2.573e-8■■■■□ 23.9
PABPN1Q86U42 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC26.48■■□□□ 1.833e-8■■■■□ 23.9
PABPN1Q86U42 AAAS-212ENST00000548931 1075 ntTSL 525.2■■□□□ 1.623e-8■■■■□ 23.9
PABPN1Q86U42 AAAS-220ENST00000552876 2016 ntTSL 223.91■■□□□ 1.423e-8■■■■□ 23.9
PABPN1Q86U42 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.373e-8■■■■□ 23.9
PABPN1Q86U42 CAPZA1-201ENST00000263168 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.233e-6■■■■□ 23.9
PABPN1Q86U42 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.384e-7■■■■□ 23.8
PABPN1Q86U42 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.314e-7■■■■□ 23.8
PABPN1Q86U42 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.034e-7■■■■□ 23.8
PABPN1Q86U42 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.014e-7■■■■□ 23.8
PABPN1Q86U42 EHMT2-211ENST00000480912 3940 ntTSL 517.23■□□□□ 0.354e-7■■■■□ 23.8
PABPN1Q86U42 DDX41-202ENST00000503078 2375 ntTSL 237.8■■■■□ 3.643e-7■■■■□ 23.8
PABPN1Q86U42 DDX41-201ENST00000330503 2137 ntTSL 1 (best)29.16■■■□□ 2.263e-7■■■■□ 23.8
PABPN1Q86U42 DDX41-207ENST00000507900 1564 ntTSL 528.9■■■□□ 2.223e-7■■■■□ 23.8
PABPN1Q86U42 DDX41-205ENST00000505081 2949 ntTSL 224.83■■□□□ 1.573e-7■■■■□ 23.8
PABPN1Q86U42 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.43e-7■■■■□ 23.8
PABPN1Q86U42 C20orf204-201ENST00000358393 1466 ntTSL 249.15■■■■■ 5.462e-11■■■■□ 23.8
PABPN1Q86U42 C20orf204-204ENST00000463337 1412 ntAPPRIS ALT2 TSL 1 (best)43.44■■■■■ 4.542e-11■■■■□ 23.8
PABPN1Q86U42 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC39.9■■■■□ 3.982e-11■■■■□ 23.8
PABPN1Q86U42 C20orf204-202ENST00000431158 2954 ntTSL 1 (best)24.61■■□□□ 1.532e-11■■■■□ 23.8
PABPN1Q86U42 C20orf204-203ENST00000444463 4303 ntTSL 1 (best)22.88■■□□□ 1.252e-11■■■■□ 23.8
PABPN1Q86U42 AC026954.2-201ENST00000315601 2349 ntAPPRIS ALT2 TSL 230.14■■■□□ 2.421e-6■■■■□ 23.8
PABPN1Q86U42 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC28.69■■■□□ 2.181e-6■■■■□ 23.8
PABPN1Q86U42 NRDC-207ENST00000475310 1025 ntTSL 214.08□□□□□ -0.162e-6■■■■□ 23.8
PABPN1Q86U42 FANCA-206ENST00000561660 762 ntTSL 536.53■■■■□ 3.444e-8■■■■□ 23.7
PABPN1Q86U42 LMBR1L-207ENST00000547698 905 ntTSL 532.4■■■□□ 2.782e-9■■■■□ 23.7
PABPN1Q86U42 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC21.03■□□□□ 0.964e-7■■■■□ 23.6
PABPN1Q86U42 MAN2C1-224ENST00000565683 3300 ntTSL 1 (best) BASIC20.13■□□□□ 0.814e-7■■■■□ 23.6
PABPN1Q86U42 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC18.83■□□□□ 0.64e-7■■■■□ 23.6
PABPN1Q86U42 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.484e-7■■■■□ 23.6
PABPN1Q86U42 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.281e-7■■■■□ 23.6
PABPN1Q86U42 COL9A2-207ENST00000482722 2887 ntTSL 1 (best)22.96■■□□□ 1.271e-7■■■■□ 23.6
PABPN1Q86U42 ACAP3-213ENST00000493992 326 ntTSL 538.49■■■■□ 3.751e-8■■■■□ 23.5
PABPN1Q86U42 MAN2C1-230ENST00000566099 1316 ntTSL 543.39■■■■■ 4.544e-7■■■■□ 23.5
PABPN1Q86U42 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC40.16■■■■■ 4.024e-7■■■■□ 23.5
PABPN1Q86U42 KLC4-219ENST00000486439 756 ntTSL 229.01■■■□□ 2.234e-7■■■■□ 23.5
PABPN1Q86U42 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.318e-7■■■■□ 23.5
PABPN1Q86U42 LMBR1L-208ENST00000547813 1024 ntTSL 528.89■■■□□ 2.222e-9■■■■□ 23.5
PABPN1Q86U42 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC27.38■■□□□ 1.974e-7■■■■□ 23.5
PABPN1Q86U42 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC26.47■■□□□ 1.834e-7■■■■□ 23.5
PABPN1Q86U42 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.754e-7■■■■□ 23.5
PABPN1Q86U42 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC24.83■■□□□ 1.574e-7■■■■□ 23.5
PABPN1Q86U42 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.554e-7■■■■□ 23.5
PABPN1Q86U42 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC24.63■■□□□ 1.534e-7■■■■□ 23.5
PABPN1Q86U42 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC23.66■■□□□ 1.384e-7■■■■□ 23.5
PABPN1Q86U42 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC23.66■■□□□ 1.384e-7■■■■□ 23.5
PABPN1Q86U42 TPD52L2-208ENST00000474176 4053 ntTSL 215.99■□□□□ 0.154e-7■■■■□ 23.5
PABPN1Q86U42 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.795e-9■■■■□ 23.4
PABPN1Q86U42 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.595e-9■■■■□ 23.4
PABPN1Q86U42 SRSF5-215ENST00000556587 1863 ntTSL 1 (best)24.34■■□□□ 1.495e-9■■■■□ 23.4
PABPN1Q86U42 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC22.27■■□□□ 1.165e-9■■■■□ 23.4
PABPN1Q86U42 SRSF5-216ENST00000556647 644 ntTSL 222.15■■□□□ 1.145e-9■■■■□ 23.4
PABPN1Q86U42 SRSF5-217ENST00000557154 1500 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.965e-9■■■■□ 23.4
PABPN1Q86U42 SRSF5-207ENST00000554465 3044 ntTSL 1 (best)14.09□□□□□ -0.155e-9■■■■□ 23.4
PABPN1Q86U42 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC34.78■■■■□ 3.161e-6■■■■□ 23.4
PABPN1Q86U42 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC32.94■■■□□ 2.861e-6■■■■□ 23.4
PABPN1Q86U42 KIF12-206ENST00000639832 2564 ntTSL 229.7■■■□□ 2.351e-6■■■■□ 23.4
PABPN1Q86U42 KIF12-208ENST00000640553 2003 ntTSL 1 (best)26.38■■□□□ 1.811e-6■■■■□ 23.4
PABPN1Q86U42 KIF12-205ENST00000498016 400 ntTSL 525.78■■□□□ 1.721e-6■■■■□ 23.4
PABPN1Q86U42 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC24.17■■□□□ 1.461e-6■■■■□ 23.4
PABPN1Q86U42 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC40.06■■■■■ 42e-9■■■■□ 23.4
PABPN1Q86U42 LIME1-210ENST00000621325 2410 ntTSL 235.68■■■■□ 3.32e-9■■■■□ 23.4
PABPN1Q86U42 LIME1-209ENST00000494776 391 ntTSL 531.43■■■□□ 2.622e-9■■■■□ 23.4
PABPN1Q86U42 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC31.12■■■□□ 2.572e-9■■■■□ 23.4
PABPN1Q86U42 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC25.69■■□□□ 1.72e-9■■■■□ 23.4
PABPN1Q86U42 MAMDC4-205ENST00000485732 4112 ntTSL 1 (best)20.16■□□□□ 0.827e-7■■■■□ 23.4
PABPN1Q86U42 PPP1R12C-206ENST00000590268 830 ntTSL 239.95■■■■□ 3.994e-7■■■■□ 23.4
PABPN1Q86U42 MCM7-204ENST00000425308 1497 ntTSL 353.65■■■■■ 6.183e-6■■■■□ 23.3
PABPN1Q86U42 AMN-205ENST00000559507 435 ntTSL 350.67■■■■■ 5.75e-8■■■■□ 23.3
PABPN1Q86U42 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC49.7■■■■■ 5.553e-6■■■■□ 23.3
PABPN1Q86U42 AMN-207ENST00000559789 393 ntAPPRIS ALT2 TSL 347.82■■■■■ 5.255e-8■■■■□ 23.3
PABPN1Q86U42 CRLF1-203ENST00000594325 1020 ntTSL 345.6■■■■■ 4.893e-6■■■■□ 23.3
PABPN1Q86U42 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC44.82■■■■■ 4.775e-8■■■■□ 23.3
PABPN1Q86U42 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC44.54■■■■■ 4.723e-6■■■■□ 23.3
PABPN1Q86U42 PHKG2-209ENST00000565924 908 ntTSL 342.84■■■■■ 4.453e-6■■■■□ 23.3
PABPN1Q86U42 EMILIN2-202ENST00000308080 1544 ntTSL 541.89■■■■■ 4.33e-6■■■■□ 23.3
PABPN1Q86U42 POLD1-204ENST00000593981 873 ntTSL 541.23■■■■■ 4.193e-6■■■■□ 23.3
PABPN1Q86U42 AKT1-215ENST00000555926 553 ntTSL 340.26■■■■■ 4.043e-6■■■■□ 23.3
PABPN1Q86U42 POLD1-208ENST00000596648 1048 ntTSL 539.63■■■■□ 3.933e-6■■■■□ 23.3
PABPN1Q86U42 AMN-202ENST00000541086 2269 ntTSL 237.36■■■■□ 3.575e-8■■■■□ 23.3
PABPN1Q86U42 POLD1-202ENST00000593407 867 ntTSL 537.33■■■■□ 3.573e-6■■■■□ 23.3
PABPN1Q86U42 HOOK2-211ENST00000589398 590 ntTSL 236.07■■■■□ 3.363e-6■■■■□ 23.3
PABPN1Q86U42 DDX51-204ENST00000541489 806 ntTSL 1 (best)35.24■■■■□ 3.233e-6■■■■□ 23.3
PABPN1Q86U42 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC35.23■■■■□ 3.233e-6■■■■□ 23.3
PABPN1Q86U42 NBEAL2-206ENST00000461036 785 ntTSL 335.18■■■■□ 3.223e-6■■■■□ 23.3
PABPN1Q86U42 PHKG2-208ENST00000565897 1068 ntTSL 534.91■■■■□ 3.183e-6■■■■□ 23.3
PABPN1Q86U42 SARS2-208ENST00000598343 541 ntTSL 534.43■■■■□ 3.13e-6■■■■□ 23.3
PABPN1Q86U42 PSMD2-218ENST00000491494 371 ntTSL 234.34■■■■□ 3.093e-6■■■■□ 23.3
PABPN1Q86U42 ITPA-204ENST00000460550 967 ntTSL 233.78■■■■□ 33e-6■■■■□ 23.3
PABPN1Q86U42 ITPA-208ENST00000483354 1028 ntTSL 333.21■■■□□ 2.913e-6■■■■□ 23.3
PABPN1Q86U42 AMT-247ENST00000637455 1512 ntTSL 533.12■■■□□ 2.893e-6■■■■□ 23.3
PABPN1Q86U42 NBEAL2-210ENST00000477412 827 ntTSL 232.85■■■□□ 2.853e-6■■■■□ 23.3
PABPN1Q86U42 AMT-243ENST00000637059 1324 ntTSL 532.81■■■□□ 2.843e-6■■■■□ 23.3
PABPN1Q86U42 ITPA-209ENST00000490838 977 ntTSL 232.74■■■□□ 2.833e-6■■■■□ 23.3
Retrieved 100 of 8,254 protein–RNA pairs in 199.7 ms