Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC32.47■■■□□ 2.79
RGPD4Q7Z3J3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
RGPD4Q7Z3J3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
RGPD4Q7Z3J3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
RGPD4Q7Z3J3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
RGPD4Q7Z3J3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
RGPD4Q7Z3J3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC32.45■■■□□ 2.78
RGPD4Q7Z3J3 MIR3960-201ENST00000583311 91 ntBASIC32.45■■■□□ 2.78
RGPD4Q7Z3J3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
RGPD4Q7Z3J3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
RGPD4Q7Z3J3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
RGPD4Q7Z3J3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
RGPD4Q7Z3J3 AC008406.3-201ENST00000620001 1374 ntBASIC32.44■■■□□ 2.78
RGPD4Q7Z3J3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
RGPD4Q7Z3J3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
RGPD4Q7Z3J3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC32.43■■■□□ 2.78
RGPD4Q7Z3J3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC32.43■■■□□ 2.78
RGPD4Q7Z3J3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC32.43■■■□□ 2.78
RGPD4Q7Z3J3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
RGPD4Q7Z3J3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
RGPD4Q7Z3J3 GRAMD4P7-201ENST00000578182 1232 ntBASIC32.42■■■□□ 2.78
RGPD4Q7Z3J3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
RGPD4Q7Z3J3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC32.42■■■□□ 2.78
RGPD4Q7Z3J3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
RGPD4Q7Z3J3 AL359258.2-201ENST00000564063 1566 ntBASIC32.41■■■□□ 2.78
RGPD4Q7Z3J3 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
RGPD4Q7Z3J3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC32.41■■■□□ 2.78
RGPD4Q7Z3J3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC32.4■■■□□ 2.78
RGPD4Q7Z3J3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
RGPD4Q7Z3J3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
RGPD4Q7Z3J3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC32.4■■■□□ 2.78
RGPD4Q7Z3J3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC32.39■■■□□ 2.78
RGPD4Q7Z3J3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC32.39■■■□□ 2.78
RGPD4Q7Z3J3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC32.38■■■□□ 2.77
RGPD4Q7Z3J3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC32.37■■■□□ 2.77
RGPD4Q7Z3J3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC32.35■■■□□ 2.77
RGPD4Q7Z3J3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC32.35■■■□□ 2.77
RGPD4Q7Z3J3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
RGPD4Q7Z3J3 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
RGPD4Q7Z3J3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC32.35■■■□□ 2.77
RGPD4Q7Z3J3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
RGPD4Q7Z3J3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
RGPD4Q7Z3J3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
RGPD4Q7Z3J3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC32.34■■■□□ 2.77
RGPD4Q7Z3J3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
RGPD4Q7Z3J3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC32.33■■■□□ 2.77
RGPD4Q7Z3J3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC32.32■■■□□ 2.77
RGPD4Q7Z3J3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
RGPD4Q7Z3J3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
RGPD4Q7Z3J3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC32.32■■■□□ 2.76
RGPD4Q7Z3J3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC32.32■■■□□ 2.76
RGPD4Q7Z3J3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC32.32■■■□□ 2.76
RGPD4Q7Z3J3 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC32.31■■■□□ 2.76
RGPD4Q7Z3J3 AL135925.1-201ENST00000605920 1701 ntBASIC32.31■■■□□ 2.76
RGPD4Q7Z3J3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
RGPD4Q7Z3J3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
RGPD4Q7Z3J3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC32.31■■■□□ 2.76
RGPD4Q7Z3J3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC32.31■■■□□ 2.76
RGPD4Q7Z3J3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
RGPD4Q7Z3J3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
RGPD4Q7Z3J3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
RGPD4Q7Z3J3 AC019171.1-201ENST00000601251 1056 ntBASIC32.3■■■□□ 2.76
RGPD4Q7Z3J3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
RGPD4Q7Z3J3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC32.3■■■□□ 2.76
RGPD4Q7Z3J3 AC239859.2-201ENST00000444165 318 ntBASIC32.3■■■□□ 2.76
RGPD4Q7Z3J3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
RGPD4Q7Z3J3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
RGPD4Q7Z3J3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
RGPD4Q7Z3J3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.28■■■□□ 2.76
RGPD4Q7Z3J3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC32.27■■■□□ 2.76
RGPD4Q7Z3J3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC32.27■■■□□ 2.76
RGPD4Q7Z3J3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC32.27■■■□□ 2.76
RGPD4Q7Z3J3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC32.27■■■□□ 2.76
RGPD4Q7Z3J3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC32.26■■■□□ 2.76
RGPD4Q7Z3J3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.75
RGPD4Q7Z3J3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
RGPD4Q7Z3J3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC32.25■■■□□ 2.75
RGPD4Q7Z3J3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
RGPD4Q7Z3J3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
RGPD4Q7Z3J3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
RGPD4Q7Z3J3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC32.24■■■□□ 2.75
RGPD4Q7Z3J3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC32.24■■■□□ 2.75
RGPD4Q7Z3J3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC32.24■■■□□ 2.75
RGPD4Q7Z3J3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
RGPD4Q7Z3J3 AC018755.3-202ENST00000596210 929 ntBASIC32.22■■■□□ 2.75
RGPD4Q7Z3J3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC32.21■■■□□ 2.75
RGPD4Q7Z3J3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
RGPD4Q7Z3J3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
RGPD4Q7Z3J3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
RGPD4Q7Z3J3 KRT16P3-201ENST00000439127 1283 ntBASIC32.19■■■□□ 2.74
RGPD4Q7Z3J3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
RGPD4Q7Z3J3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC32.19■■■□□ 2.74
RGPD4Q7Z3J3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC32.17■■■□□ 2.74
RGPD4Q7Z3J3 UNC93B8-201ENST00000511903 705 ntBASIC32.17■■■□□ 2.74
RGPD4Q7Z3J3 AC131281.2-201ENST00000520478 145 ntBASIC32.17■■■□□ 2.74
RGPD4Q7Z3J3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC32.17■■■□□ 2.74
RGPD4Q7Z3J3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC32.16■■■□□ 2.74
RGPD4Q7Z3J3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
RGPD4Q7Z3J3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC32.15■■■□□ 2.74
RGPD4Q7Z3J3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms