Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
DCLRE1AQ6PJP8 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.63■■□□□ 1.85
DCLRE1AQ6PJP8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.63■■□□□ 1.85
DCLRE1AQ6PJP8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.62■■□□□ 1.85
DCLRE1AQ6PJP8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.62■■□□□ 1.85
DCLRE1AQ6PJP8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
DCLRE1AQ6PJP8 AL033527.3-201ENST00000566366 1196 ntBASIC26.62■■□□□ 1.85
DCLRE1AQ6PJP8 AC133552.2-201ENST00000619106 1032 ntBASIC26.62■■□□□ 1.85
DCLRE1AQ6PJP8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
DCLRE1AQ6PJP8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.61■■□□□ 1.85
DCLRE1AQ6PJP8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
DCLRE1AQ6PJP8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.61■■□□□ 1.85
DCLRE1AQ6PJP8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
DCLRE1AQ6PJP8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
DCLRE1AQ6PJP8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
DCLRE1AQ6PJP8 AC009831.1-201ENST00000580420 1582 ntBASIC26.61■■□□□ 1.85
DCLRE1AQ6PJP8 DRD5P2-201ENST00000421395 2012 ntBASIC26.61■■□□□ 1.85
DCLRE1AQ6PJP8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.61■■□□□ 1.85
DCLRE1AQ6PJP8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
DCLRE1AQ6PJP8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
DCLRE1AQ6PJP8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
DCLRE1AQ6PJP8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.6■■□□□ 1.85
DCLRE1AQ6PJP8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DCLRE1AQ6PJP8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
DCLRE1AQ6PJP8 WHAMMP3-201ENST00000611636 1609 ntBASIC26.59■■□□□ 1.85
DCLRE1AQ6PJP8 RP9P-202ENST00000450133 1212 ntBASIC26.59■■□□□ 1.85
DCLRE1AQ6PJP8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.59■■□□□ 1.85
DCLRE1AQ6PJP8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.59■■□□□ 1.85
DCLRE1AQ6PJP8 AC026202.3-201ENST00000600805 1127 ntBASIC26.59■■□□□ 1.85
DCLRE1AQ6PJP8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
DCLRE1AQ6PJP8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
DCLRE1AQ6PJP8 AC004987.1-201ENST00000428627 508 ntBASIC26.58■■□□□ 1.85
DCLRE1AQ6PJP8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
DCLRE1AQ6PJP8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
DCLRE1AQ6PJP8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
DCLRE1AQ6PJP8 TSPY13P-201ENST00000338964 914 ntBASIC26.57■■□□□ 1.84
DCLRE1AQ6PJP8 ATP5G2P3-201ENST00000429083 425 ntBASIC26.57■■□□□ 1.84
DCLRE1AQ6PJP8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
DCLRE1AQ6PJP8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
DCLRE1AQ6PJP8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
DCLRE1AQ6PJP8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.56■■□□□ 1.84
DCLRE1AQ6PJP8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
DCLRE1AQ6PJP8 AL592293.1-201ENST00000502889 1188 ntBASIC26.56■■□□□ 1.84
DCLRE1AQ6PJP8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
DCLRE1AQ6PJP8 MIR3960-201ENST00000583311 91 ntBASIC26.55■■□□□ 1.84
DCLRE1AQ6PJP8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
DCLRE1AQ6PJP8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.54■■□□□ 1.84
DCLRE1AQ6PJP8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DCLRE1AQ6PJP8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
DCLRE1AQ6PJP8 AC093536.1-201ENST00000569153 554 ntBASIC26.54■■□□□ 1.84
DCLRE1AQ6PJP8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
DCLRE1AQ6PJP8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DCLRE1AQ6PJP8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
DCLRE1AQ6PJP8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.53■■□□□ 1.84
DCLRE1AQ6PJP8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
DCLRE1AQ6PJP8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.53■■□□□ 1.84
DCLRE1AQ6PJP8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
DCLRE1AQ6PJP8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
DCLRE1AQ6PJP8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
DCLRE1AQ6PJP8 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.52■■□□□ 1.84
DCLRE1AQ6PJP8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.52■■□□□ 1.84
DCLRE1AQ6PJP8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
DCLRE1AQ6PJP8 AL359504.2-201ENST00000605506 1601 ntBASIC26.52■■□□□ 1.84
DCLRE1AQ6PJP8 AC129492.7-201ENST00000622992 756 ntBASIC26.52■■□□□ 1.84
DCLRE1AQ6PJP8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.51■■□□□ 1.84
DCLRE1AQ6PJP8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
DCLRE1AQ6PJP8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
DCLRE1AQ6PJP8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
DCLRE1AQ6PJP8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DCLRE1AQ6PJP8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DCLRE1AQ6PJP8 RAP2CP1-202ENST00000605179 643 ntBASIC26.5■■□□□ 1.83
DCLRE1AQ6PJP8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
DCLRE1AQ6PJP8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
DCLRE1AQ6PJP8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
DCLRE1AQ6PJP8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
DCLRE1AQ6PJP8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.48■■□□□ 1.83
DCLRE1AQ6PJP8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
DCLRE1AQ6PJP8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
DCLRE1AQ6PJP8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
DCLRE1AQ6PJP8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.47■■□□□ 1.83
DCLRE1AQ6PJP8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
DCLRE1AQ6PJP8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.47■■□□□ 1.83
DCLRE1AQ6PJP8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
DCLRE1AQ6PJP8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
DCLRE1AQ6PJP8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
DCLRE1AQ6PJP8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.46■■□□□ 1.83
DCLRE1AQ6PJP8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
DCLRE1AQ6PJP8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
DCLRE1AQ6PJP8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
DCLRE1AQ6PJP8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
DCLRE1AQ6PJP8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
DCLRE1AQ6PJP8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
DCLRE1AQ6PJP8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
DCLRE1AQ6PJP8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
DCLRE1AQ6PJP8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.45■■□□□ 1.82
DCLRE1AQ6PJP8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.45■■□□□ 1.82
DCLRE1AQ6PJP8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
DCLRE1AQ6PJP8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.44■■□□□ 1.82
DCLRE1AQ6PJP8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DCLRE1AQ6PJP8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms