Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
C11orf88Q6PI97 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
C11orf88Q6PI97 AC145676.1-201ENST00000514988 2004 ntBASIC21.19■□□□□ 0.98
C11orf88Q6PI97 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
C11orf88Q6PI97 AC093323.1-202ENST00000635031 2045 ntBASIC21.19■□□□□ 0.98
C11orf88Q6PI97 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.19■□□□□ 0.98
C11orf88Q6PI97 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
C11orf88Q6PI97 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
C11orf88Q6PI97 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
C11orf88Q6PI97 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
C11orf88Q6PI97 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
C11orf88Q6PI97 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
C11orf88Q6PI97 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
C11orf88Q6PI97 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
C11orf88Q6PI97 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
C11orf88Q6PI97 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.18■□□□□ 0.98
C11orf88Q6PI97 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
C11orf88Q6PI97 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.18■□□□□ 0.98
C11orf88Q6PI97 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C11orf88Q6PI97 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.17■□□□□ 0.98
C11orf88Q6PI97 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.17■□□□□ 0.98
C11orf88Q6PI97 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
C11orf88Q6PI97 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
C11orf88Q6PI97 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
C11orf88Q6PI97 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.16■□□□□ 0.98
C11orf88Q6PI97 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.16■□□□□ 0.98
C11orf88Q6PI97 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
C11orf88Q6PI97 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
C11orf88Q6PI97 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.15■□□□□ 0.98
C11orf88Q6PI97 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
C11orf88Q6PI97 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
C11orf88Q6PI97 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
C11orf88Q6PI97 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C11orf88Q6PI97 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.15■□□□□ 0.98
C11orf88Q6PI97 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C11orf88Q6PI97 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C11orf88Q6PI97 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
C11orf88Q6PI97 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
C11orf88Q6PI97 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
C11orf88Q6PI97 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
C11orf88Q6PI97 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
C11orf88Q6PI97 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
C11orf88Q6PI97 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
C11orf88Q6PI97 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
C11orf88Q6PI97 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.14■□□□□ 0.97
C11orf88Q6PI97 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
C11orf88Q6PI97 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
C11orf88Q6PI97 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C11orf88Q6PI97 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.13■□□□□ 0.97
C11orf88Q6PI97 DUX4L29-201ENST00000425409 679 ntBASIC21.13■□□□□ 0.97
C11orf88Q6PI97 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
C11orf88Q6PI97 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
C11orf88Q6PI97 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
C11orf88Q6PI97 ZNRF2P2-203ENST00000454624 420 ntBASIC21.12■□□□□ 0.97
C11orf88Q6PI97 AC108673.1-201ENST00000510422 1159 ntBASIC21.12■□□□□ 0.97
C11orf88Q6PI97 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
C11orf88Q6PI97 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
C11orf88Q6PI97 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.12■□□□□ 0.97
C11orf88Q6PI97 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C11orf88Q6PI97 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C11orf88Q6PI97 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
C11orf88Q6PI97 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
C11orf88Q6PI97 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
C11orf88Q6PI97 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C11orf88Q6PI97 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
C11orf88Q6PI97 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C11orf88Q6PI97 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
C11orf88Q6PI97 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.1■□□□□ 0.97
C11orf88Q6PI97 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.1■□□□□ 0.97
C11orf88Q6PI97 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C11orf88Q6PI97 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.1■□□□□ 0.97
C11orf88Q6PI97 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C11orf88Q6PI97 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.1■□□□□ 0.97
C11orf88Q6PI97 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
C11orf88Q6PI97 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C11orf88Q6PI97 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.09■□□□□ 0.97
C11orf88Q6PI97 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.09■□□□□ 0.97
C11orf88Q6PI97 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
C11orf88Q6PI97 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
C11orf88Q6PI97 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
C11orf88Q6PI97 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
C11orf88Q6PI97 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
C11orf88Q6PI97 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
C11orf88Q6PI97 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.07■□□□□ 0.96
C11orf88Q6PI97 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
C11orf88Q6PI97 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
C11orf88Q6PI97 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.07■□□□□ 0.96
C11orf88Q6PI97 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
C11orf88Q6PI97 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
C11orf88Q6PI97 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.07■□□□□ 0.96
C11orf88Q6PI97 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
C11orf88Q6PI97 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
C11orf88Q6PI97 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C11orf88Q6PI97 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
C11orf88Q6PI97 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
C11orf88Q6PI97 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.06■□□□□ 0.96
C11orf88Q6PI97 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C11orf88Q6PI97 HLA-V-202ENST00000446817 847 ntBASIC21.06■□□□□ 0.96
C11orf88Q6PI97 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.06■□□□□ 0.96
C11orf88Q6PI97 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms