Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.78■□□□□ 0.76
TMEM88Q6PEY1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TMEM88Q6PEY1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM88Q6PEY1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TMEM88Q6PEY1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM88Q6PEY1 RARRES2P7-201ENST00000567349 469 ntBASIC19.77■□□□□ 0.76
TMEM88Q6PEY1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TMEM88Q6PEY1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TMEM88Q6PEY1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM88Q6PEY1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TMEM88Q6PEY1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TMEM88Q6PEY1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM88Q6PEY1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TMEM88Q6PEY1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM88Q6PEY1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM88Q6PEY1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TMEM88Q6PEY1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TMEM88Q6PEY1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.75■□□□□ 0.75
TMEM88Q6PEY1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM88Q6PEY1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TMEM88Q6PEY1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.75■□□□□ 0.75
TMEM88Q6PEY1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
TMEM88Q6PEY1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88Q6PEY1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88Q6PEY1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88Q6PEY1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88Q6PEY1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TMEM88Q6PEY1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.74■□□□□ 0.75
TMEM88Q6PEY1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM88Q6PEY1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM88Q6PEY1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM88Q6PEY1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM88Q6PEY1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM88Q6PEY1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM88Q6PEY1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TMEM88Q6PEY1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM88Q6PEY1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM88Q6PEY1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TMEM88Q6PEY1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.72■□□□□ 0.75
TMEM88Q6PEY1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TMEM88Q6PEY1 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM88Q6PEY1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM88Q6PEY1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM88Q6PEY1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.71■□□□□ 0.75
TMEM88Q6PEY1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM88Q6PEY1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM88Q6PEY1 DUSP8P4-201ENST00000399538 1761 ntBASIC19.71■□□□□ 0.75
TMEM88Q6PEY1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.71■□□□□ 0.75
TMEM88Q6PEY1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM88Q6PEY1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM88Q6PEY1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
TMEM88Q6PEY1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM88Q6PEY1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM88Q6PEY1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM88Q6PEY1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM88Q6PEY1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM88Q6PEY1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEM88Q6PEY1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM88Q6PEY1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM88Q6PEY1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TMEM88Q6PEY1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TMEM88Q6PEY1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.68■□□□□ 0.74
TMEM88Q6PEY1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM88Q6PEY1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM88Q6PEY1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.67■□□□□ 0.74
TMEM88Q6PEY1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM88Q6PEY1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TMEM88Q6PEY1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEM88Q6PEY1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TMEM88Q6PEY1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TMEM88Q6PEY1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TMEM88Q6PEY1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEM88Q6PEY1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM88Q6PEY1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM88Q6PEY1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TMEM88Q6PEY1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM88Q6PEY1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM88Q6PEY1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM88Q6PEY1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM88Q6PEY1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM88Q6PEY1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TMEM88Q6PEY1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.64■□□□□ 0.74
TMEM88Q6PEY1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TMEM88Q6PEY1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM88Q6PEY1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM88Q6PEY1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM88Q6PEY1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.64■□□□□ 0.73
TMEM88Q6PEY1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TMEM88Q6PEY1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TMEM88Q6PEY1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.63■□□□□ 0.73
TMEM88Q6PEY1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM88Q6PEY1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM88Q6PEY1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM88Q6PEY1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.62■□□□□ 0.73
TMEM88Q6PEY1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM88Q6PEY1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TMEM88Q6PEY1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TMEM88Q6PEY1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.61■□□□□ 0.73
TMEM88Q6PEY1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM88Q6PEY1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms