Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PPP4R3AQ6IN85 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PPP4R3AQ6IN85 AL449106.1-201ENST00000608517 1980 ntBASIC28.17■■■□□ 2.1
PPP4R3AQ6IN85 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
PPP4R3AQ6IN85 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
PPP4R3AQ6IN85 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.16■■■□□ 2.1
PPP4R3AQ6IN85 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PPP4R3AQ6IN85 AC060814.1-201ENST00000554326 538 ntBASIC28.16■■■□□ 2.1
PPP4R3AQ6IN85 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PPP4R3AQ6IN85 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PPP4R3AQ6IN85 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
PPP4R3AQ6IN85 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
PPP4R3AQ6IN85 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PPP4R3AQ6IN85 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
PPP4R3AQ6IN85 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PPP4R3AQ6IN85 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.09
PPP4R3AQ6IN85 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
PPP4R3AQ6IN85 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.13■■■□□ 2.09
PPP4R3AQ6IN85 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
PPP4R3AQ6IN85 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.13■■■□□ 2.09
PPP4R3AQ6IN85 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PPP4R3AQ6IN85 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
PPP4R3AQ6IN85 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.12■■■□□ 2.09
PPP4R3AQ6IN85 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
PPP4R3AQ6IN85 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PPP4R3AQ6IN85 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PPP4R3AQ6IN85 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
PPP4R3AQ6IN85 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PPP4R3AQ6IN85 AC022413.1-201ENST00000624602 984 ntBASIC28.11■■■□□ 2.09
PPP4R3AQ6IN85 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
PPP4R3AQ6IN85 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PPP4R3AQ6IN85 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
PPP4R3AQ6IN85 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PPP4R3AQ6IN85 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
PPP4R3AQ6IN85 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.1■■■□□ 2.09
PPP4R3AQ6IN85 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PPP4R3AQ6IN85 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
PPP4R3AQ6IN85 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.09■■■□□ 2.09
PPP4R3AQ6IN85 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
PPP4R3AQ6IN85 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PPP4R3AQ6IN85 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PPP4R3AQ6IN85 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PPP4R3AQ6IN85 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.08■■■□□ 2.09
PPP4R3AQ6IN85 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PPP4R3AQ6IN85 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
PPP4R3AQ6IN85 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
PPP4R3AQ6IN85 GPX1-201ENST00000419349 1106 ntBASIC28.07■■■□□ 2.08
PPP4R3AQ6IN85 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.07■■■□□ 2.08
PPP4R3AQ6IN85 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.07■■■□□ 2.08
PPP4R3AQ6IN85 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.07■■■□□ 2.08
PPP4R3AQ6IN85 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PPP4R3AQ6IN85 AC092296.2-201ENST00000589470 999 ntBASIC28.06■■■□□ 2.08
PPP4R3AQ6IN85 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
PPP4R3AQ6IN85 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
PPP4R3AQ6IN85 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
PPP4R3AQ6IN85 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
PPP4R3AQ6IN85 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
PPP4R3AQ6IN85 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PPP4R3AQ6IN85 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PPP4R3AQ6IN85 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PPP4R3AQ6IN85 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.04■■■□□ 2.08
PPP4R3AQ6IN85 AL157400.5-201ENST00000507624 621 ntBASIC28.04■■■□□ 2.08
PPP4R3AQ6IN85 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.04■■■□□ 2.08
PPP4R3AQ6IN85 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PPP4R3AQ6IN85 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PPP4R3AQ6IN85 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.04■■■□□ 2.08
PPP4R3AQ6IN85 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PPP4R3AQ6IN85 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PPP4R3AQ6IN85 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
PPP4R3AQ6IN85 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
PPP4R3AQ6IN85 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PPP4R3AQ6IN85 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PPP4R3AQ6IN85 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PPP4R3AQ6IN85 AL121749.1-202ENST00000609313 2153 ntBASIC28.01■■■□□ 2.08
PPP4R3AQ6IN85 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.01■■■□□ 2.07
PPP4R3AQ6IN85 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
PPP4R3AQ6IN85 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
PPP4R3AQ6IN85 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PPP4R3AQ6IN85 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PPP4R3AQ6IN85 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PPP4R3AQ6IN85 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.99■■■□□ 2.07
PPP4R3AQ6IN85 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC27.99■■■□□ 2.07
PPP4R3AQ6IN85 HES4-202ENST00000428771 1040 ntTSL 2 BASIC27.99■■■□□ 2.07
PPP4R3AQ6IN85 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.99■■■□□ 2.07
PPP4R3AQ6IN85 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
PPP4R3AQ6IN85 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PPP4R3AQ6IN85 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
PPP4R3AQ6IN85 HSD17B1P1-201ENST00000590052 955 ntBASIC27.98■■■□□ 2.07
PPP4R3AQ6IN85 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PPP4R3AQ6IN85 AC142472.1-201ENST00000612013 1741 ntBASIC27.97■■■□□ 2.07
PPP4R3AQ6IN85 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
PPP4R3AQ6IN85 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
PPP4R3AQ6IN85 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
PPP4R3AQ6IN85 AL359504.2-201ENST00000605506 1601 ntBASIC27.96■■■□□ 2.07
PPP4R3AQ6IN85 ECEL1P2-201ENST00000461596 1295 ntBASIC27.96■■■□□ 2.07
PPP4R3AQ6IN85 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.96■■■□□ 2.07
PPP4R3AQ6IN85 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.96■■■□□ 2.07
PPP4R3AQ6IN85 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.95■■■□□ 2.07
PPP4R3AQ6IN85 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
PPP4R3AQ6IN85 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms