Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHRFAM7AQ494W8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.41■■□□□ 1.02
CHRFAM7AQ494W8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CHRFAM7AQ494W8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHRFAM7AQ494W8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
CHRFAM7AQ494W8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHRFAM7AQ494W8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHRFAM7AQ494W8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHRFAM7AQ494W8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.4■■□□□ 1.02
CHRFAM7AQ494W8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.4■■□□□ 1.02
CHRFAM7AQ494W8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CHRFAM7AQ494W8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHRFAM7AQ494W8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.39■■□□□ 1.02
CHRFAM7AQ494W8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.39■■□□□ 1.02
CHRFAM7AQ494W8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.39■■□□□ 1.02
CHRFAM7AQ494W8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHRFAM7AQ494W8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CHRFAM7AQ494W8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHRFAM7AQ494W8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHRFAM7AQ494W8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHRFAM7AQ494W8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.39■■□□□ 1.01
CHRFAM7AQ494W8 AC022413.1-201ENST00000624602 984 ntBASIC21.38■■□□□ 1.01
CHRFAM7AQ494W8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CHRFAM7AQ494W8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.38■■□□□ 1.01
CHRFAM7AQ494W8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.37■■□□□ 1.01
CHRFAM7AQ494W8 AC100797.4-201ENST00000631653 1827 ntBASIC21.36■■□□□ 1.01
CHRFAM7AQ494W8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.36■■□□□ 1.01
CHRFAM7AQ494W8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
CHRFAM7AQ494W8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.36■■□□□ 1.01
CHRFAM7AQ494W8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.36■■□□□ 1.01
CHRFAM7AQ494W8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHRFAM7AQ494W8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHRFAM7AQ494W8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHRFAM7AQ494W8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.35■■□□□ 1.01
CHRFAM7AQ494W8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHRFAM7AQ494W8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHRFAM7AQ494W8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHRFAM7AQ494W8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CHRFAM7AQ494W8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CHRFAM7AQ494W8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
CHRFAM7AQ494W8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.32■■□□□ 1
CHRFAM7AQ494W8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CHRFAM7AQ494W8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHRFAM7AQ494W8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHRFAM7AQ494W8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
CHRFAM7AQ494W8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHRFAM7AQ494W8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.32■■□□□ 1
CHRFAM7AQ494W8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CHRFAM7AQ494W8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHRFAM7AQ494W8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CHRFAM7AQ494W8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.3■■□□□ 1
CHRFAM7AQ494W8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CHRFAM7AQ494W8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CHRFAM7AQ494W8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHRFAM7AQ494W8 AC135731.1-201ENST00000569415 2548 ntBASIC21.3■■□□□ 1
CHRFAM7AQ494W8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CHRFAM7AQ494W8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHRFAM7AQ494W8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.29■■□□□ 1
CHRFAM7AQ494W8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.29■■□□□ 1
CHRFAM7AQ494W8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CHRFAM7AQ494W8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHRFAM7AQ494W8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 AL449106.1-201ENST00000608517 1980 ntBASIC21.28■■□□□ 1
CHRFAM7AQ494W8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CHRFAM7AQ494W8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHRFAM7AQ494W8 AP002414.2-202ENST00000590929 1450 ntBASIC21.27■■□□□ 1
CHRFAM7AQ494W8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CHRFAM7AQ494W8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHRFAM7AQ494W8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CHRFAM7AQ494W8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
CHRFAM7AQ494W8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.27■■□□□ 1
CHRFAM7AQ494W8 AC018358.1-201ENST00000631079 1402 ntBASIC21.27■■□□□ 1
CHRFAM7AQ494W8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CHRFAM7AQ494W8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CHRFAM7AQ494W8 AL033527.3-201ENST00000566366 1196 ntBASIC21.26■□□□□ 0.99
CHRFAM7AQ494W8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHRFAM7AQ494W8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHRFAM7AQ494W8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHRFAM7AQ494W8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHRFAM7AQ494W8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHRFAM7AQ494W8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHRFAM7AQ494W8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHRFAM7AQ494W8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms