Protein–RNA interactions for Protein: Q2WGJ8

TMEM249, Transmembrane protein 249, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249Q2WGJ8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM249Q2WGJ8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM249Q2WGJ8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TMEM249Q2WGJ8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM249Q2WGJ8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.84■□□□□ 0.93
TMEM249Q2WGJ8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM249Q2WGJ8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM249Q2WGJ8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM249Q2WGJ8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TMEM249Q2WGJ8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TMEM249Q2WGJ8 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.83■□□□□ 0.93
TMEM249Q2WGJ8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM249Q2WGJ8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM249Q2WGJ8 SMPD5-203ENST00000639008 1464 ntBASIC20.82■□□□□ 0.92
TMEM249Q2WGJ8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
TMEM249Q2WGJ8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM249Q2WGJ8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM249Q2WGJ8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM249Q2WGJ8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM249Q2WGJ8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM249Q2WGJ8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.81■□□□□ 0.92
TMEM249Q2WGJ8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM249Q2WGJ8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM249Q2WGJ8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM249Q2WGJ8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TMEM249Q2WGJ8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM249Q2WGJ8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.8■□□□□ 0.92
TMEM249Q2WGJ8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TMEM249Q2WGJ8 AP004833.2-201ENST00000532228 1454 ntBASIC20.8■□□□□ 0.92
TMEM249Q2WGJ8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM249Q2WGJ8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM249Q2WGJ8 AL359258.2-201ENST00000564063 1566 ntBASIC20.8■□□□□ 0.92
TMEM249Q2WGJ8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM249Q2WGJ8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM249Q2WGJ8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM249Q2WGJ8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.79■□□□□ 0.92
TMEM249Q2WGJ8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TMEM249Q2WGJ8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM249Q2WGJ8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.78■□□□□ 0.92
TMEM249Q2WGJ8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM249Q2WGJ8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM249Q2WGJ8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM249Q2WGJ8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM249Q2WGJ8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM249Q2WGJ8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM249Q2WGJ8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.77■□□□□ 0.92
TMEM249Q2WGJ8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TMEM249Q2WGJ8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM249Q2WGJ8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM249Q2WGJ8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM249Q2WGJ8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.77■□□□□ 0.92
TMEM249Q2WGJ8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TMEM249Q2WGJ8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.76■□□□□ 0.91
TMEM249Q2WGJ8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM249Q2WGJ8 AC026202.3-201ENST00000600805 1127 ntBASIC20.76■□□□□ 0.91
TMEM249Q2WGJ8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
TMEM249Q2WGJ8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.76■□□□□ 0.91
TMEM249Q2WGJ8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM249Q2WGJ8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM249Q2WGJ8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM249Q2WGJ8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TMEM249Q2WGJ8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM249Q2WGJ8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM249Q2WGJ8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.75■□□□□ 0.91
TMEM249Q2WGJ8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TMEM249Q2WGJ8 AL035685.1-201ENST00000636663 812 ntBASIC20.75■□□□□ 0.91
TMEM249Q2WGJ8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM249Q2WGJ8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM249Q2WGJ8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM249Q2WGJ8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM249Q2WGJ8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM249Q2WGJ8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.74■□□□□ 0.91
TMEM249Q2WGJ8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM249Q2WGJ8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.74■□□□□ 0.91
TMEM249Q2WGJ8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.74■□□□□ 0.91
TMEM249Q2WGJ8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TMEM249Q2WGJ8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM249Q2WGJ8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM249Q2WGJ8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.73■□□□□ 0.91
TMEM249Q2WGJ8 AC100797.4-201ENST00000631653 1827 ntBASIC20.73■□□□□ 0.91
TMEM249Q2WGJ8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM249Q2WGJ8 AC025884.2-201ENST00000553429 711 ntBASIC20.72■□□□□ 0.91
TMEM249Q2WGJ8 AL451085.2-201ENST00000605085 799 ntBASIC20.72■□□□□ 0.91
TMEM249Q2WGJ8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM249Q2WGJ8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM249Q2WGJ8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM249Q2WGJ8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM249Q2WGJ8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM249Q2WGJ8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.7■□□□□ 0.9
TMEM249Q2WGJ8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM249Q2WGJ8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM249Q2WGJ8 DUX4L9-201ENST00000449051 1259 ntBASIC20.7■□□□□ 0.9
TMEM249Q2WGJ8 RP9P-202ENST00000450133 1212 ntBASIC20.7■□□□□ 0.9
TMEM249Q2WGJ8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM249Q2WGJ8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.7■□□□□ 0.9
TMEM249Q2WGJ8 BHLHE23-202ENST00000612929 1109 ntBASIC20.7■□□□□ 0.9
TMEM249Q2WGJ8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM249Q2WGJ8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM249Q2WGJ8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM249Q2WGJ8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms