Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPCS3P61009 AP004609.3-201ENST00000610705 1884 ntBASIC19.94■□□□□ 0.78
SPCS3P61009 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.94■□□□□ 0.78
SPCS3P61009 MIR3665-201ENST00000578708 105 ntBASIC19.93■□□□□ 0.78
SPCS3P61009 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPCS3P61009 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.93■□□□□ 0.78
SPCS3P61009 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPCS3P61009 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPCS3P61009 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPCS3P61009 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.92■□□□□ 0.78
SPCS3P61009 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPCS3P61009 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SPCS3P61009 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.92■□□□□ 0.78
SPCS3P61009 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.92■□□□□ 0.78
SPCS3P61009 AC092803.2-201ENST00000564287 1899 ntBASIC19.92■□□□□ 0.78
SPCS3P61009 DUSP8P4-201ENST00000399538 1761 ntBASIC19.91■□□□□ 0.78
SPCS3P61009 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.91■□□□□ 0.78
SPCS3P61009 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPCS3P61009 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPCS3P61009 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPCS3P61009 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SPCS3P61009 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPCS3P61009 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPCS3P61009 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPCS3P61009 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPCS3P61009 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.89■□□□□ 0.77
SPCS3P61009 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.89■□□□□ 0.77
SPCS3P61009 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SPCS3P61009 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPCS3P61009 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPCS3P61009 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SPCS3P61009 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPCS3P61009 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SPCS3P61009 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.88■□□□□ 0.77
SPCS3P61009 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPCS3P61009 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SPCS3P61009 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
SPCS3P61009 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPCS3P61009 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPCS3P61009 AC020928.2-201ENST00000588717 2197 ntBASIC19.87■□□□□ 0.77
SPCS3P61009 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPCS3P61009 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPCS3P61009 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPCS3P61009 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SPCS3P61009 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPCS3P61009 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SPCS3P61009 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPCS3P61009 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.85■□□□□ 0.77
SPCS3P61009 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SPCS3P61009 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SPCS3P61009 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SPCS3P61009 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPCS3P61009 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SPCS3P61009 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPCS3P61009 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPCS3P61009 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPCS3P61009 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SPCS3P61009 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.84■□□□□ 0.77
SPCS3P61009 AC110285.7-201ENST00000624417 1536 ntBASIC19.84■□□□□ 0.77
SPCS3P61009 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPCS3P61009 AC142472.1-201ENST00000612013 1741 ntBASIC19.83■□□□□ 0.77
SPCS3P61009 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SPCS3P61009 AP006261.1-201ENST00000584783 668 ntBASIC19.83■□□□□ 0.77
SPCS3P61009 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPCS3P61009 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPCS3P61009 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPCS3P61009 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.83■□□□□ 0.76
SPCS3P61009 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SPCS3P61009 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPCS3P61009 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.82■□□□□ 0.76
SPCS3P61009 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SPCS3P61009 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPCS3P61009 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPCS3P61009 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SPCS3P61009 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
SPCS3P61009 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SPCS3P61009 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.81■□□□□ 0.76
SPCS3P61009 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPCS3P61009 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.81■□□□□ 0.76
SPCS3P61009 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SPCS3P61009 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SPCS3P61009 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.8■□□□□ 0.76
SPCS3P61009 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPCS3P61009 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.8■□□□□ 0.76
SPCS3P61009 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.8■□□□□ 0.76
SPCS3P61009 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.8■□□□□ 0.76
SPCS3P61009 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SPCS3P61009 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SPCS3P61009 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.8■□□□□ 0.76
SPCS3P61009 WHAMMP3-201ENST00000611636 1609 ntBASIC19.8■□□□□ 0.76
SPCS3P61009 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPCS3P61009 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPCS3P61009 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.79■□□□□ 0.76
SPCS3P61009 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPCS3P61009 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPCS3P61009 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPCS3P61009 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPCS3P61009 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.78■□□□□ 0.76
SPCS3P61009 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPCS3P61009 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms