Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PAX9P55771 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAX9P55771 AC136428.2-201ENST00000563187 214 ntBASIC19.84■□□□□ 0.77
PAX9P55771 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PAX9P55771 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PAX9P55771 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PAX9P55771 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAX9P55771 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PAX9P55771 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PAX9P55771 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PAX9P55771 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PAX9P55771 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PAX9P55771 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PAX9P55771 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PAX9P55771 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.82■□□□□ 0.76
PAX9P55771 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PAX9P55771 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PAX9P55771 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
PAX9P55771 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PAX9P55771 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PAX9P55771 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PAX9P55771 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.82■□□□□ 0.76
PAX9P55771 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PAX9P55771 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PAX9P55771 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PAX9P55771 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
PAX9P55771 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.81■□□□□ 0.76
PAX9P55771 AC097358.2-201ENST00000607541 1159 ntBASIC19.81■□□□□ 0.76
PAX9P55771 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PAX9P55771 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PAX9P55771 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PAX9P55771 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PAX9P55771 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.8■□□□□ 0.76
PAX9P55771 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PAX9P55771 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.8■□□□□ 0.76
PAX9P55771 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PAX9P55771 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.8■□□□□ 0.76
PAX9P55771 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PAX9P55771 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PAX9P55771 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.79■□□□□ 0.76
PAX9P55771 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.79■□□□□ 0.76
PAX9P55771 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PAX9P55771 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PAX9P55771 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PAX9P55771 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PAX9P55771 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.78■□□□□ 0.76
PAX9P55771 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.78■□□□□ 0.76
PAX9P55771 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PAX9P55771 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.77■□□□□ 0.76
PAX9P55771 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
PAX9P55771 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PAX9P55771 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PAX9P55771 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PAX9P55771 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
PAX9P55771 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PAX9P55771 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PAX9P55771 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PAX9P55771 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PAX9P55771 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PAX9P55771 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PAX9P55771 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.76■□□□□ 0.75
PAX9P55771 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PAX9P55771 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PAX9P55771 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PAX9P55771 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PAX9P55771 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.75■□□□□ 0.75
PAX9P55771 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PAX9P55771 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PAX9P55771 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PAX9P55771 AC142381.3-201ENST00000568208 1670 ntBASIC19.74■□□□□ 0.75
PAX9P55771 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PAX9P55771 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PAX9P55771 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PAX9P55771 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.73■□□□□ 0.75
PAX9P55771 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.73■□□□□ 0.75
PAX9P55771 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PAX9P55771 AC108673.1-201ENST00000510422 1159 ntBASIC19.73■□□□□ 0.75
PAX9P55771 MIR6090-201ENST00000622481 60 ntBASIC19.73■□□□□ 0.75
PAX9P55771 AC010501.1-201ENST00000606270 1962 ntBASIC19.73■□□□□ 0.75
PAX9P55771 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
PAX9P55771 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PAX9P55771 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PAX9P55771 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PAX9P55771 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
PAX9P55771 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PAX9P55771 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.72■□□□□ 0.75
PAX9P55771 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PAX9P55771 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PAX9P55771 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PAX9P55771 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PAX9P55771 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.71■□□□□ 0.75
PAX9P55771 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PAX9P55771 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PAX9P55771 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
PAX9P55771 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PAX9P55771 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PAX9P55771 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PAX9P55771 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PAX9P55771 WHAMMP3-201ENST00000611636 1609 ntBASIC19.7■□□□□ 0.74
PAX9P55771 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms