Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.26■□□□□ 0.99
ATP1B3P54709 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATP1B3P54709 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATP1B3P54709 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP1B3P54709 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.26■□□□□ 0.99
ATP1B3P54709 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP1B3P54709 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP1B3P54709 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP1B3P54709 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP1B3P54709 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP1B3P54709 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP1B3P54709 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.25■□□□□ 0.99
ATP1B3P54709 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.25■□□□□ 0.99
ATP1B3P54709 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP1B3P54709 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP1B3P54709 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP1B3P54709 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP1B3P54709 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ATP1B3P54709 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP1B3P54709 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP1B3P54709 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP1B3P54709 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ATP1B3P54709 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP1B3P54709 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP1B3P54709 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP1B3P54709 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP1B3P54709 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP1B3P54709 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP1B3P54709 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP1B3P54709 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP1B3P54709 AP004609.3-201ENST00000610705 1884 ntBASIC21.22■□□□□ 0.99
ATP1B3P54709 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.22■□□□□ 0.99
ATP1B3P54709 LINC01971-201ENST00000617888 1048 ntBASIC21.22■□□□□ 0.99
ATP1B3P54709 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP1B3P54709 WHAMMP3-201ENST00000611636 1609 ntBASIC21.21■□□□□ 0.99
ATP1B3P54709 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP1B3P54709 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ATP1B3P54709 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP1B3P54709 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.2■□□□□ 0.98
ATP1B3P54709 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP1B3P54709 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
ATP1B3P54709 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP1B3P54709 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP1B3P54709 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ATP1B3P54709 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP1B3P54709 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP1B3P54709 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP1B3P54709 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP1B3P54709 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ATP1B3P54709 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
ATP1B3P54709 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ATP1B3P54709 AC091060.1-201ENST00000623524 1766 ntBASIC21.17■□□□□ 0.98
ATP1B3P54709 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP1B3P54709 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP1B3P54709 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.16■□□□□ 0.98
ATP1B3P54709 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ATP1B3P54709 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP1B3P54709 DUX4L13-201ENST00000554103 1267 ntBASIC21.15■□□□□ 0.98
ATP1B3P54709 DUX4L15-201ENST00000611059 1267 ntBASIC21.15■□□□□ 0.98
ATP1B3P54709 DUX4L23-201ENST00000615195 1269 ntBASIC21.15■□□□□ 0.98
ATP1B3P54709 DUX4L24-201ENST00000617576 1269 ntBASIC21.15■□□□□ 0.98
ATP1B3P54709 DUX4L22-201ENST00000618238 1269 ntBASIC21.15■□□□□ 0.98
ATP1B3P54709 DUX4L20-201ENST00000619712 1269 ntBASIC21.15■□□□□ 0.98
ATP1B3P54709 DUX4L21-201ENST00000622058 1269 ntBASIC21.15■□□□□ 0.98
ATP1B3P54709 DUX4L10-201ENST00000622460 1267 ntBASIC21.15■□□□□ 0.98
ATP1B3P54709 DUX4L25-201ENST00000624915 1269 ntBASIC21.15■□□□□ 0.98
ATP1B3P54709 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP1B3P54709 AC142472.1-201ENST00000612013 1741 ntBASIC21.15■□□□□ 0.98
ATP1B3P54709 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP1B3P54709 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ATP1B3P54709 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP1B3P54709 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
ATP1B3P54709 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP1B3P54709 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ATP1B3P54709 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.13■□□□□ 0.97
ATP1B3P54709 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.13■□□□□ 0.97
ATP1B3P54709 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.13■□□□□ 0.97
ATP1B3P54709 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
ATP1B3P54709 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.13■□□□□ 0.97
ATP1B3P54709 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP1B3P54709 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP1B3P54709 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATP1B3P54709 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP1B3P54709 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.12■□□□□ 0.97
ATP1B3P54709 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP1B3P54709 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ATP1B3P54709 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP1B3P54709 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP1B3P54709 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP1B3P54709 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP1B3P54709 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ATP1B3P54709 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP1B3P54709 AC008813.1-201ENST00000536597 885 ntBASIC21.11■□□□□ 0.97
ATP1B3P54709 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP1B3P54709 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP1B3P54709 AC145676.1-201ENST00000514988 2004 ntBASIC21.11■□□□□ 0.97
ATP1B3P54709 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP1B3P54709 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP1B3P54709 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
ATP1B3P54709 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms