Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.9■■□□□ 1.26
RNF144AP50876 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.9■■□□□ 1.26
RNF144AP50876 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
RNF144AP50876 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
RNF144AP50876 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RNF144AP50876 MIR219A2-201ENST00000608502 1504 ntBASIC22.89■■□□□ 1.26
RNF144AP50876 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.89■■□□□ 1.25
RNF144AP50876 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RNF144AP50876 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF144AP50876 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF144AP50876 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RNF144AP50876 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.87■■□□□ 1.25
RNF144AP50876 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.87■■□□□ 1.25
RNF144AP50876 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
RNF144AP50876 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
RNF144AP50876 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.87■■□□□ 1.25
RNF144AP50876 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF144AP50876 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF144AP50876 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RNF144AP50876 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF144AP50876 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF144AP50876 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF144AP50876 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF144AP50876 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF144AP50876 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF144AP50876 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
RNF144AP50876 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF144AP50876 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.85■■□□□ 1.25
RNF144AP50876 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.85■■□□□ 1.25
RNF144AP50876 WHAMMP3-201ENST00000611636 1609 ntBASIC22.84■■□□□ 1.25
RNF144AP50876 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.84■■□□□ 1.25
RNF144AP50876 AC008813.1-201ENST00000536597 885 ntBASIC22.84■■□□□ 1.25
RNF144AP50876 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.84■■□□□ 1.25
RNF144AP50876 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF144AP50876 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
RNF144AP50876 AP004609.3-201ENST00000610705 1884 ntBASIC22.83■■□□□ 1.25
RNF144AP50876 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.83■■□□□ 1.25
RNF144AP50876 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.83■■□□□ 1.25
RNF144AP50876 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.83■■□□□ 1.25
RNF144AP50876 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.83■■□□□ 1.25
RNF144AP50876 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.83■■□□□ 1.25
RNF144AP50876 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RNF144AP50876 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
RNF144AP50876 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
RNF144AP50876 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.82■■□□□ 1.24
RNF144AP50876 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF144AP50876 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF144AP50876 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF144AP50876 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.82■■□□□ 1.24
RNF144AP50876 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.82■■□□□ 1.24
RNF144AP50876 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RNF144AP50876 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RNF144AP50876 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.81■■□□□ 1.24
RNF144AP50876 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
RNF144AP50876 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RNF144AP50876 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
RNF144AP50876 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RNF144AP50876 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RNF144AP50876 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RNF144AP50876 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RNF144AP50876 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RNF144AP50876 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RNF144AP50876 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
RNF144AP50876 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RNF144AP50876 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.78■■□□□ 1.24
RNF144AP50876 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RNF144AP50876 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RNF144AP50876 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RNF144AP50876 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.78■■□□□ 1.24
RNF144AP50876 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RNF144AP50876 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RNF144AP50876 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RNF144AP50876 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
RNF144AP50876 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RNF144AP50876 AC148477.6-201ENST00000623746 465 ntBASIC22.77■■□□□ 1.24
RNF144AP50876 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
RNF144AP50876 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
RNF144AP50876 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.77■■□□□ 1.24
RNF144AP50876 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.76■■□□□ 1.23
RNF144AP50876 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
RNF144AP50876 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
RNF144AP50876 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.76■■□□□ 1.23
RNF144AP50876 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
RNF144AP50876 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RNF144AP50876 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
RNF144AP50876 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RNF144AP50876 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RNF144AP50876 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
RNF144AP50876 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.75■■□□□ 1.23
RNF144AP50876 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
RNF144AP50876 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.75■■□□□ 1.23
RNF144AP50876 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.74■■□□□ 1.23
RNF144AP50876 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.74■■□□□ 1.23
RNF144AP50876 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.74■■□□□ 1.23
RNF144AP50876 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
RNF144AP50876 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.74■■□□□ 1.23
RNF144AP50876 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.73■■□□□ 1.23
RNF144AP50876 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RNF144AP50876 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RNF144AP50876 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms