Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CXCL5P42830 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CXCL5P42830 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CXCL5P42830 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CXCL5P42830 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CXCL5P42830 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
CXCL5P42830 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CXCL5P42830 HNRNPLP2-201ENST00000568980 1570 ntBASIC16.51■□□□□ 0.23
CXCL5P42830 DUSP8P4-201ENST00000399538 1761 ntBASIC16.51■□□□□ 0.23
CXCL5P42830 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CXCL5P42830 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXCL5P42830 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CXCL5P42830 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC16.51■□□□□ 0.23
CXCL5P42830 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC16.51■□□□□ 0.23
CXCL5P42830 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CXCL5P42830 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXCL5P42830 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXCL5P42830 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC16.5■□□□□ 0.23
CXCL5P42830 AC092803.2-201ENST00000564287 1899 ntBASIC16.5■□□□□ 0.23
CXCL5P42830 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CXCL5P42830 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
CXCL5P42830 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CXCL5P42830 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CXCL5P42830 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CXCL5P42830 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXCL5P42830 AP004609.3-201ENST00000610705 1884 ntBASIC16.48■□□□□ 0.23
CXCL5P42830 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXCL5P42830 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CXCL5P42830 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC16.48■□□□□ 0.23
CXCL5P42830 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXCL5P42830 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CXCL5P42830 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
CXCL5P42830 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC16.47■□□□□ 0.23
CXCL5P42830 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL5P42830 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.47■□□□□ 0.23
CXCL5P42830 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CXCL5P42830 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.47■□□□□ 0.23
CXCL5P42830 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL5P42830 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CXCL5P42830 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL5P42830 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16.46■□□□□ 0.23
CXCL5P42830 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CXCL5P42830 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CXCL5P42830 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CXCL5P42830 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CXCL5P42830 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CXCL5P42830 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CXCL5P42830 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC16.45■□□□□ 0.22
CXCL5P42830 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CXCL5P42830 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CXCL5P42830 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.44■□□□□ 0.22
CXCL5P42830 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CXCL5P42830 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CXCL5P42830 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CXCL5P42830 AC142472.1-201ENST00000612013 1741 ntBASIC16.43■□□□□ 0.22
CXCL5P42830 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC16.43■□□□□ 0.22
CXCL5P42830 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CXCL5P42830 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CXCL5P42830 AC020928.2-201ENST00000588717 2197 ntBASIC16.43■□□□□ 0.22
CXCL5P42830 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCL5P42830 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCL5P42830 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCL5P42830 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC16.42■□□□□ 0.22
CXCL5P42830 SUZ12P1-203ENST00000578195 985 ntBASIC16.42■□□□□ 0.22
CXCL5P42830 MIR6090-201ENST00000622481 60 ntBASIC16.42■□□□□ 0.22
CXCL5P42830 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCL5P42830 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCL5P42830 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCL5P42830 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC16.42■□□□□ 0.22
CXCL5P42830 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CXCL5P42830 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC16.41■□□□□ 0.22
CXCL5P42830 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC16.41■□□□□ 0.22
CXCL5P42830 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CXCL5P42830 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CXCL5P42830 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC16.41■□□□□ 0.22
CXCL5P42830 CALM3-209ENST00000597743 577 ntTSL 4 BASIC16.41■□□□□ 0.22
CXCL5P42830 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CXCL5P42830 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CXCL5P42830 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC16.41■□□□□ 0.22
CXCL5P42830 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC16.41■□□□□ 0.22
CXCL5P42830 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CXCL5P42830 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC16.4■□□□□ 0.22
CXCL5P42830 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCL5P42830 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCL5P42830 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CXCL5P42830 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CXCL5P42830 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCL5P42830 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCL5P42830 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CXCL5P42830 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.39■□□□□ 0.22
CXCL5P42830 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CXCL5P42830 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCL5P42830 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CXCL5P42830 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CXCL5P42830 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCL5P42830 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCL5P42830 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC16.39■□□□□ 0.21
CXCL5P42830 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
CXCL5P42830 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CXCL5P42830 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms