Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SMPD5-203ENST00000639008 1464 ntBASIC20.94■□□□□ 0.94
COL8A2P25067 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL8A2P25067 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.94■□□□□ 0.94
COL8A2P25067 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL8A2P25067 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL8A2P25067 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL8A2P25067 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL8A2P25067 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL8A2P25067 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.93■□□□□ 0.94
COL8A2P25067 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.92■□□□□ 0.94
COL8A2P25067 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL8A2P25067 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL8A2P25067 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL8A2P25067 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.91■□□□□ 0.94
COL8A2P25067 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.91■□□□□ 0.94
COL8A2P25067 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
COL8A2P25067 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL8A2P25067 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
COL8A2P25067 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL8A2P25067 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
COL8A2P25067 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
COL8A2P25067 AC007029.1-201ENST00000604183 313 ntBASIC20.89■□□□□ 0.93
COL8A2P25067 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL8A2P25067 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
COL8A2P25067 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.88■□□□□ 0.93
COL8A2P25067 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.88■□□□□ 0.93
COL8A2P25067 AC012354.3-201ENST00000623734 483 ntBASIC20.88■□□□□ 0.93
COL8A2P25067 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.87■□□□□ 0.93
COL8A2P25067 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL8A2P25067 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.87■□□□□ 0.93
COL8A2P25067 AC025884.2-201ENST00000553429 711 ntBASIC20.87■□□□□ 0.93
COL8A2P25067 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
COL8A2P25067 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL8A2P25067 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL8A2P25067 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL8A2P25067 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL8A2P25067 KRT18P60-201ENST00000312876 1297 ntBASIC20.86■□□□□ 0.93
COL8A2P25067 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
COL8A2P25067 WHAMMP3-201ENST00000611636 1609 ntBASIC20.86■□□□□ 0.93
COL8A2P25067 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL8A2P25067 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL8A2P25067 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL8A2P25067 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL8A2P25067 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.84■□□□□ 0.93
COL8A2P25067 AL033527.3-201ENST00000566366 1196 ntBASIC20.84■□□□□ 0.93
COL8A2P25067 AC133552.2-201ENST00000619106 1032 ntBASIC20.84■□□□□ 0.93
COL8A2P25067 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL8A2P25067 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL8A2P25067 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.83■□□□□ 0.93
COL8A2P25067 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL8A2P25067 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
COL8A2P25067 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL8A2P25067 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL8A2P25067 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
COL8A2P25067 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
COL8A2P25067 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL8A2P25067 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL8A2P25067 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.82■□□□□ 0.92
COL8A2P25067 AC009831.1-201ENST00000580420 1582 ntBASIC20.82■□□□□ 0.92
COL8A2P25067 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL8A2P25067 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL8A2P25067 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL8A2P25067 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
COL8A2P25067 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL8A2P25067 AL359504.2-201ENST00000605506 1601 ntBASIC20.82■□□□□ 0.92
COL8A2P25067 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL8A2P25067 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL8A2P25067 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
COL8A2P25067 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.81■□□□□ 0.92
COL8A2P25067 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL8A2P25067 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL8A2P25067 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.81■□□□□ 0.92
COL8A2P25067 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL8A2P25067 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL8A2P25067 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL8A2P25067 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
COL8A2P25067 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL8A2P25067 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL8A2P25067 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL8A2P25067 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL8A2P25067 RP9P-202ENST00000450133 1212 ntBASIC20.8■□□□□ 0.92
COL8A2P25067 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.8■□□□□ 0.92
COL8A2P25067 AC026202.3-201ENST00000600805 1127 ntBASIC20.8■□□□□ 0.92
COL8A2P25067 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL8A2P25067 LINC01003-201ENST00000564834 1764 ntBASIC20.8■□□□□ 0.92
COL8A2P25067 AC004987.1-201ENST00000428627 508 ntBASIC20.79■□□□□ 0.92
COL8A2P25067 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.79■□□□□ 0.92
COL8A2P25067 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.79■□□□□ 0.92
COL8A2P25067 AL592293.1-201ENST00000502889 1188 ntBASIC20.79■□□□□ 0.92
COL8A2P25067 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
COL8A2P25067 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.79■□□□□ 0.92
COL8A2P25067 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.79■□□□□ 0.92
COL8A2P25067 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL8A2P25067 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL8A2P25067 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL8A2P25067 AC093536.1-201ENST00000569153 554 ntBASIC20.78■□□□□ 0.92
COL8A2P25067 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.78■□□□□ 0.92
COL8A2P25067 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.78■□□□□ 0.92
COL8A2P25067 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
COL8A2P25067 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms