Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CCND1P24385 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CCND1P24385 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CCND1P24385 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCND1P24385 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCND1P24385 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.68■■□□□ 1.54
CCND1P24385 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CCND1P24385 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.68■■□□□ 1.54
CCND1P24385 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCND1P24385 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCND1P24385 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CCND1P24385 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.66■■□□□ 1.54
CCND1P24385 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.66■■□□□ 1.54
CCND1P24385 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.66■■□□□ 1.54
CCND1P24385 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCND1P24385 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCND1P24385 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCND1P24385 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.65■■□□□ 1.54
CCND1P24385 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCND1P24385 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCND1P24385 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.65■■□□□ 1.54
CCND1P24385 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
CCND1P24385 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCND1P24385 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCND1P24385 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
CCND1P24385 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CCND1P24385 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
CCND1P24385 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCND1P24385 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCND1P24385 ZNRF2P2-203ENST00000454624 420 ntBASIC24.63■■□□□ 1.53
CCND1P24385 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.63■■□□□ 1.53
CCND1P24385 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCND1P24385 AP002414.2-202ENST00000590929 1450 ntBASIC24.63■■□□□ 1.53
CCND1P24385 ABHD17AP4-201ENST00000411545 909 ntBASIC24.62■■□□□ 1.53
CCND1P24385 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.62■■□□□ 1.53
CCND1P24385 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCND1P24385 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.61■■□□□ 1.53
CCND1P24385 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.61■■□□□ 1.53
CCND1P24385 AC145676.1-201ENST00000514988 2004 ntBASIC24.61■■□□□ 1.53
CCND1P24385 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.61■■□□□ 1.53
CCND1P24385 LINC01003-201ENST00000564834 1764 ntBASIC24.61■■□□□ 1.53
CCND1P24385 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.61■■□□□ 1.53
CCND1P24385 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCND1P24385 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCND1P24385 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCND1P24385 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CCND1P24385 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.6■■□□□ 1.53
CCND1P24385 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCND1P24385 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CCND1P24385 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.59■■□□□ 1.53
CCND1P24385 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CCND1P24385 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCND1P24385 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCND1P24385 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.58■■□□□ 1.53
CCND1P24385 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCND1P24385 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CCND1P24385 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CCND1P24385 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CCND1P24385 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
CCND1P24385 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CCND1P24385 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CCND1P24385 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCND1P24385 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CCND1P24385 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCND1P24385 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
CCND1P24385 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCND1P24385 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CCND1P24385 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.56■■□□□ 1.52
CCND1P24385 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
CCND1P24385 AC110285.7-201ENST00000624417 1536 ntBASIC24.56■■□□□ 1.52
CCND1P24385 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CCND1P24385 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.55■■□□□ 1.52
CCND1P24385 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.55■■□□□ 1.52
CCND1P24385 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.55■■□□□ 1.52
CCND1P24385 DUX4L11-201ENST00000611504 1267 ntBASIC24.55■■□□□ 1.52
CCND1P24385 DUX4L12-201ENST00000614593 1267 ntBASIC24.55■■□□□ 1.52
CCND1P24385 DUX4L14-201ENST00000621227 1267 ntBASIC24.55■■□□□ 1.52
CCND1P24385 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.55■■□□□ 1.52
CCND1P24385 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCND1P24385 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.55■■□□□ 1.52
CCND1P24385 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCND1P24385 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCND1P24385 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCND1P24385 DUX4L13-201ENST00000554103 1267 ntBASIC24.54■■□□□ 1.52
CCND1P24385 DUX4L15-201ENST00000611059 1267 ntBASIC24.54■■□□□ 1.52
CCND1P24385 DUX4L23-201ENST00000615195 1269 ntBASIC24.54■■□□□ 1.52
CCND1P24385 DUX4L24-201ENST00000617576 1269 ntBASIC24.54■■□□□ 1.52
CCND1P24385 DUX4L22-201ENST00000618238 1269 ntBASIC24.54■■□□□ 1.52
CCND1P24385 DUX4L20-201ENST00000619712 1269 ntBASIC24.54■■□□□ 1.52
CCND1P24385 DUX4L21-201ENST00000622058 1269 ntBASIC24.54■■□□□ 1.52
CCND1P24385 DUX4L10-201ENST00000622460 1267 ntBASIC24.54■■□□□ 1.52
CCND1P24385 DUX4L25-201ENST00000624915 1269 ntBASIC24.54■■□□□ 1.52
CCND1P24385 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCND1P24385 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.53■■□□□ 1.52
CCND1P24385 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CCND1P24385 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CCND1P24385 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCND1P24385 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCND1P24385 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCND1P24385 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms