Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC018358.1-201ENST00000631079 1402 ntBASIC24.06■■□□□ 1.44
CDH3P22223 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDH3P22223 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.06■■□□□ 1.44
CDH3P22223 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.06■■□□□ 1.44
CDH3P22223 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.05■■□□□ 1.44
CDH3P22223 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.05■■□□□ 1.44
CDH3P22223 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CDH3P22223 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDH3P22223 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
CDH3P22223 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.05■■□□□ 1.44
CDH3P22223 DRD5P2-201ENST00000421395 2012 ntBASIC24.05■■□□□ 1.44
CDH3P22223 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDH3P22223 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
CDH3P22223 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDH3P22223 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.03■■□□□ 1.44
CDH3P22223 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDH3P22223 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDH3P22223 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDH3P22223 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CDH3P22223 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDH3P22223 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.02■■□□□ 1.44
CDH3P22223 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.02■■□□□ 1.44
CDH3P22223 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
CDH3P22223 AL359258.2-201ENST00000564063 1566 ntBASIC24.02■■□□□ 1.44
CDH3P22223 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.01■■□□□ 1.43
CDH3P22223 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDH3P22223 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDH3P22223 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.01■■□□□ 1.43
CDH3P22223 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
CDH3P22223 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDH3P22223 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDH3P22223 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CDH3P22223 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24■■□□□ 1.43
CDH3P22223 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDH3P22223 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDH3P22223 ABHD17AP5-201ENST00000580133 923 ntBASIC23.99■■□□□ 1.43
CDH3P22223 AC092296.2-201ENST00000589470 999 ntBASIC23.99■■□□□ 1.43
CDH3P22223 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDH3P22223 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDH3P22223 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.98■■□□□ 1.43
CDH3P22223 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CDH3P22223 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDH3P22223 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.97■■□□□ 1.43
CDH3P22223 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.97■■□□□ 1.43
CDH3P22223 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
CDH3P22223 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDH3P22223 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDH3P22223 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.96■■□□□ 1.43
CDH3P22223 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.95■■□□□ 1.43
CDH3P22223 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CDH3P22223 ECEL1P2-201ENST00000461596 1295 ntBASIC23.95■■□□□ 1.42
CDH3P22223 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.95■■□□□ 1.42
CDH3P22223 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDH3P22223 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDH3P22223 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.94■■□□□ 1.42
CDH3P22223 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.93■■□□□ 1.42
CDH3P22223 AL157400.5-201ENST00000507624 621 ntBASIC23.93■■□□□ 1.42
CDH3P22223 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.93■■□□□ 1.42
CDH3P22223 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDH3P22223 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CDH3P22223 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDH3P22223 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.92■■□□□ 1.42
CDH3P22223 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CDH3P22223 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDH3P22223 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDH3P22223 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.91■■□□□ 1.42
CDH3P22223 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDH3P22223 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.91■■□□□ 1.42
CDH3P22223 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDH3P22223 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDH3P22223 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDH3P22223 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDH3P22223 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDH3P22223 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.9■■□□□ 1.42
CDH3P22223 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDH3P22223 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDH3P22223 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDH3P22223 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CDH3P22223 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDH3P22223 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
CDH3P22223 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.88■■□□□ 1.41
CDH3P22223 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CDH3P22223 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
CDH3P22223 AC142086.6-201ENST00000621154 1765 ntBASIC23.88■■□□□ 1.41
CDH3P22223 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDH3P22223 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CDH3P22223 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
CDH3P22223 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
CDH3P22223 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
CDH3P22223 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDH3P22223 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.86■■□□□ 1.41
CDH3P22223 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDH3P22223 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDH3P22223 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.86■■□□□ 1.41
CDH3P22223 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.86■■□□□ 1.41
CDH3P22223 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDH3P22223 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDH3P22223 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.85■■□□□ 1.41
CDH3P22223 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDH3P22223 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms