Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
MSR1P21757 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSR1P21757 AC016575.1-201ENST00000607026 382 ntBASIC21.82■■□□□ 1.08
MSR1P21757 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSR1P21757 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSR1P21757 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
MSR1P21757 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.81■■□□□ 1.08
MSR1P21757 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MSR1P21757 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MSR1P21757 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.8■■□□□ 1.08
MSR1P21757 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MSR1P21757 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MSR1P21757 AP004609.3-201ENST00000610705 1884 ntBASIC21.79■■□□□ 1.08
MSR1P21757 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
MSR1P21757 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MSR1P21757 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.79■■□□□ 1.08
MSR1P21757 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
MSR1P21757 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.79■■□□□ 1.08
MSR1P21757 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
MSR1P21757 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MSR1P21757 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MSR1P21757 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
MSR1P21757 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MSR1P21757 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
MSR1P21757 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MSR1P21757 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MSR1P21757 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MSR1P21757 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MSR1P21757 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
MSR1P21757 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.77■■□□□ 1.08
MSR1P21757 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MSR1P21757 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MSR1P21757 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MSR1P21757 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MSR1P21757 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MSR1P21757 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.76■■□□□ 1.07
MSR1P21757 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MSR1P21757 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.75■■□□□ 1.07
MSR1P21757 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSR1P21757 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
MSR1P21757 AC142472.1-201ENST00000612013 1741 ntBASIC21.75■■□□□ 1.07
MSR1P21757 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSR1P21757 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.75■■□□□ 1.07
MSR1P21757 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MSR1P21757 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSR1P21757 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.75■■□□□ 1.07
MSR1P21757 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
MSR1P21757 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.75■■□□□ 1.07
MSR1P21757 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSR1P21757 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.75■■□□□ 1.07
MSR1P21757 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSR1P21757 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSR1P21757 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
MSR1P21757 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
MSR1P21757 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MSR1P21757 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.72■■□□□ 1.07
MSR1P21757 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSR1P21757 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSR1P21757 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.72■■□□□ 1.07
MSR1P21757 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSR1P21757 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSR1P21757 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.72■■□□□ 1.07
MSR1P21757 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MSR1P21757 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.72■■□□□ 1.07
MSR1P21757 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSR1P21757 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MSR1P21757 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MSR1P21757 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MSR1P21757 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.71■■□□□ 1.07
MSR1P21757 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.71■■□□□ 1.07
MSR1P21757 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MSR1P21757 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.7■■□□□ 1.06
MSR1P21757 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MSR1P21757 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MSR1P21757 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
MSR1P21757 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.7■■□□□ 1.06
MSR1P21757 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
MSR1P21757 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MSR1P21757 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MSR1P21757 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MSR1P21757 AL359258.2-201ENST00000564063 1566 ntBASIC21.69■■□□□ 1.06
MSR1P21757 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MSR1P21757 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.68■■□□□ 1.06
MSR1P21757 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MSR1P21757 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MSR1P21757 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.67■■□□□ 1.06
MSR1P21757 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MSR1P21757 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.67■■□□□ 1.06
MSR1P21757 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MSR1P21757 AC126177.7-201ENST00000547904 679 ntBASIC21.67■■□□□ 1.06
MSR1P21757 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.66■■□□□ 1.06
MSR1P21757 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
MSR1P21757 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
MSR1P21757 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
MSR1P21757 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.66■■□□□ 1.06
MSR1P21757 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MSR1P21757 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.65■■□□□ 1.06
MSR1P21757 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
MSR1P21757 MIR639-201ENST00000384974 98 ntBASIC21.65■■□□□ 1.06
MSR1P21757 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms