Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 WHAMMP3-201ENST00000611636 1609 ntBASIC22.27■■□□□ 1.16
HMGN1P05114 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.27■■□□□ 1.16
HMGN1P05114 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.27■■□□□ 1.16
HMGN1P05114 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HMGN1P05114 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HMGN1P05114 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HMGN1P05114 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.26■■□□□ 1.15
HMGN1P05114 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.26■■□□□ 1.15
HMGN1P05114 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
HMGN1P05114 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HMGN1P05114 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HMGN1P05114 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HMGN1P05114 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
HMGN1P05114 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HMGN1P05114 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HMGN1P05114 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HMGN1P05114 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.24■■□□□ 1.15
HMGN1P05114 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HMGN1P05114 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
HMGN1P05114 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HMGN1P05114 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.24■■□□□ 1.15
HMGN1P05114 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HMGN1P05114 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HMGN1P05114 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
HMGN1P05114 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HMGN1P05114 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HMGN1P05114 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
HMGN1P05114 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HMGN1P05114 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
HMGN1P05114 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HMGN1P05114 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.22■■□□□ 1.15
HMGN1P05114 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
HMGN1P05114 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HMGN1P05114 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.22■■□□□ 1.15
HMGN1P05114 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HMGN1P05114 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HMGN1P05114 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.22■■□□□ 1.15
HMGN1P05114 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
HMGN1P05114 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HMGN1P05114 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
HMGN1P05114 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
HMGN1P05114 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HMGN1P05114 AC087741.3-201ENST00000624270 1347 ntBASIC22.2■■□□□ 1.14
HMGN1P05114 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HMGN1P05114 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.2■■□□□ 1.14
HMGN1P05114 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.2■■□□□ 1.14
HMGN1P05114 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HMGN1P05114 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
HMGN1P05114 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.19■■□□□ 1.14
HMGN1P05114 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.19■■□□□ 1.14
HMGN1P05114 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
HMGN1P05114 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HMGN1P05114 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HMGN1P05114 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HMGN1P05114 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
HMGN1P05114 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HMGN1P05114 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HMGN1P05114 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HMGN1P05114 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HMGN1P05114 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HMGN1P05114 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.17■■□□□ 1.14
HMGN1P05114 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
HMGN1P05114 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HMGN1P05114 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
HMGN1P05114 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HMGN1P05114 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HMGN1P05114 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HMGN1P05114 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HMGN1P05114 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.15■■□□□ 1.14
HMGN1P05114 AC044849.2-201ENST00000606596 710 ntBASIC22.15■■□□□ 1.14
HMGN1P05114 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
HMGN1P05114 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
HMGN1P05114 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HMGN1P05114 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HMGN1P05114 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HMGN1P05114 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HMGN1P05114 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.14■■□□□ 1.13
HMGN1P05114 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
HMGN1P05114 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGN1P05114 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGN1P05114 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.13■■□□□ 1.13
HMGN1P05114 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGN1P05114 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.13■■□□□ 1.13
HMGN1P05114 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.12■■□□□ 1.13
HMGN1P05114 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
HMGN1P05114 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HMGN1P05114 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HMGN1P05114 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HMGN1P05114 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.12■■□□□ 1.13
HMGN1P05114 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HMGN1P05114 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.12■■□□□ 1.13
HMGN1P05114 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
HMGN1P05114 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HMGN1P05114 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HMGN1P05114 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HMGN1P05114 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HMGN1P05114 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
HMGN1P05114 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.11■■□□□ 1.13
HMGN1P05114 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
HMGN1P05114 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms