Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LCATP04180 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LCATP04180 HLA-V-202ENST00000446817 847 ntBASIC21.53■■□□□ 1.04
LCATP04180 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LCATP04180 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
LCATP04180 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.52■■□□□ 1.04
LCATP04180 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LCATP04180 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LCATP04180 AC148477.6-201ENST00000623746 465 ntBASIC21.52■■□□□ 1.04
LCATP04180 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
LCATP04180 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.52■■□□□ 1.04
LCATP04180 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.52■■□□□ 1.03
LCATP04180 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
LCATP04180 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
LCATP04180 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LCATP04180 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.51■■□□□ 1.03
LCATP04180 AC016575.1-201ENST00000607026 382 ntBASIC21.51■■□□□ 1.03
LCATP04180 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LCATP04180 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
LCATP04180 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LCATP04180 AP004609.3-201ENST00000610705 1884 ntBASIC21.51■■□□□ 1.03
LCATP04180 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.51■■□□□ 1.03
LCATP04180 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LCATP04180 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LCATP04180 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LCATP04180 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LCATP04180 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
LCATP04180 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.49■■□□□ 1.03
LCATP04180 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
LCATP04180 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LCATP04180 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LCATP04180 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.48■■□□□ 1.03
LCATP04180 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.48■■□□□ 1.03
LCATP04180 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.48■■□□□ 1.03
LCATP04180 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LCATP04180 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LCATP04180 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LCATP04180 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LCATP04180 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.47■■□□□ 1.03
LCATP04180 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LCATP04180 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.47■■□□□ 1.03
LCATP04180 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LCATP04180 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LCATP04180 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
LCATP04180 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.46■■□□□ 1.03
LCATP04180 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.46■■□□□ 1.03
LCATP04180 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
LCATP04180 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
LCATP04180 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
LCATP04180 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.45■■□□□ 1.02
LCATP04180 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LCATP04180 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
LCATP04180 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LCATP04180 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LCATP04180 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LCATP04180 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.45■■□□□ 1.02
LCATP04180 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LCATP04180 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LCATP04180 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
LCATP04180 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LCATP04180 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
LCATP04180 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
LCATP04180 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.44■■□□□ 1.02
LCATP04180 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.43■■□□□ 1.02
LCATP04180 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
LCATP04180 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
LCATP04180 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LCATP04180 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
LCATP04180 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LCATP04180 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
LCATP04180 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
LCATP04180 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.42■■□□□ 1.02
LCATP04180 AC142472.1-201ENST00000612013 1741 ntBASIC21.42■■□□□ 1.02
LCATP04180 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.41■■□□□ 1.02
LCATP04180 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LCATP04180 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LCATP04180 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.41■■□□□ 1.02
LCATP04180 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LCATP04180 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.41■■□□□ 1.02
LCATP04180 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
LCATP04180 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.4■■□□□ 1.02
LCATP04180 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.4■■□□□ 1.02
LCATP04180 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LCATP04180 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LCATP04180 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LCATP04180 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LCATP04180 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
LCATP04180 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LCATP04180 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.39■■□□□ 1.01
LCATP04180 AL359258.2-201ENST00000564063 1566 ntBASIC21.39■■□□□ 1.01
LCATP04180 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.39■■□□□ 1.01
LCATP04180 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LCATP04180 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.38■■□□□ 1.01
LCATP04180 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LCATP04180 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LCATP04180 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.38■■□□□ 1.01
LCATP04180 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LCATP04180 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.37■■□□□ 1.01
LCATP04180 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.37■■□□□ 1.01
LCATP04180 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms