Protein–RNA interactions for Protein: O95801

TTC4, Tetratricopeptide repeat protein 4, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4O95801 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TTC4O95801 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
TTC4O95801 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.26■■□□□ 1.63
TTC4O95801 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.26■■□□□ 1.63
TTC4O95801 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TTC4O95801 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TTC4O95801 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TTC4O95801 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
TTC4O95801 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.26■■□□□ 1.63
TTC4O95801 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.26■■□□□ 1.63
TTC4O95801 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TTC4O95801 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
TTC4O95801 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
TTC4O95801 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TTC4O95801 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.25■■□□□ 1.63
TTC4O95801 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
TTC4O95801 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TTC4O95801 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.24■■□□□ 1.63
TTC4O95801 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
TTC4O95801 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
TTC4O95801 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
TTC4O95801 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
TTC4O95801 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TTC4O95801 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
TTC4O95801 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.22■■□□□ 1.63
TTC4O95801 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TTC4O95801 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.22■■□□□ 1.63
TTC4O95801 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TTC4O95801 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TTC4O95801 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.21■■□□□ 1.63
TTC4O95801 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
TTC4O95801 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.2■■□□□ 1.63
TTC4O95801 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
TTC4O95801 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
TTC4O95801 AC110285.7-201ENST00000624417 1536 ntBASIC25.2■■□□□ 1.62
TTC4O95801 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
TTC4O95801 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TTC4O95801 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TTC4O95801 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TTC4O95801 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.19■■□□□ 1.62
TTC4O95801 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TTC4O95801 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.18■■□□□ 1.62
TTC4O95801 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TTC4O95801 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TTC4O95801 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
TTC4O95801 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TTC4O95801 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
TTC4O95801 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.17■■□□□ 1.62
TTC4O95801 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
TTC4O95801 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
TTC4O95801 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
TTC4O95801 AC021231.2-201ENST00000594613 730 ntBASIC25.16■■□□□ 1.62
TTC4O95801 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
TTC4O95801 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
TTC4O95801 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TTC4O95801 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
TTC4O95801 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
TTC4O95801 DUX4L29-201ENST00000425409 679 ntBASIC25.15■■□□□ 1.62
TTC4O95801 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TTC4O95801 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
TTC4O95801 AC142472.1-201ENST00000612013 1741 ntBASIC25.15■■□□□ 1.62
TTC4O95801 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
TTC4O95801 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.14■■□□□ 1.62
TTC4O95801 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.14■■□□□ 1.62
TTC4O95801 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
TTC4O95801 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
TTC4O95801 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
TTC4O95801 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
TTC4O95801 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
TTC4O95801 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TTC4O95801 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TTC4O95801 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
TTC4O95801 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TTC4O95801 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.13■■□□□ 1.61
TTC4O95801 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.13■■□□□ 1.61
TTC4O95801 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TTC4O95801 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TTC4O95801 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.12■■□□□ 1.61
TTC4O95801 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TTC4O95801 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.12■■□□□ 1.61
TTC4O95801 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.11■■□□□ 1.61
TTC4O95801 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
TTC4O95801 AC093323.1-202ENST00000635031 2045 ntBASIC25.11■■□□□ 1.61
TTC4O95801 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.11■■□□□ 1.61
TTC4O95801 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TTC4O95801 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TTC4O95801 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
TTC4O95801 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.1■■□□□ 1.61
TTC4O95801 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TTC4O95801 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TTC4O95801 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TTC4O95801 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TTC4O95801 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.09■■□□□ 1.61
TTC4O95801 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.09■■□□□ 1.61
TTC4O95801 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TTC4O95801 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TTC4O95801 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
TTC4O95801 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TTC4O95801 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TTC4O95801 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms