Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 DUX4L23-201ENST00000615195 1269 ntBASIC24.91■■□□□ 1.58
USP1O94782 DUX4L24-201ENST00000617576 1269 ntBASIC24.91■■□□□ 1.58
USP1O94782 DUX4L22-201ENST00000618238 1269 ntBASIC24.91■■□□□ 1.58
USP1O94782 DUX4L20-201ENST00000619712 1269 ntBASIC24.91■■□□□ 1.58
USP1O94782 DUX4L21-201ENST00000622058 1269 ntBASIC24.91■■□□□ 1.58
USP1O94782 DUX4L10-201ENST00000622460 1267 ntBASIC24.91■■□□□ 1.58
USP1O94782 DUX4L25-201ENST00000624915 1269 ntBASIC24.91■■□□□ 1.58
USP1O94782 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
USP1O94782 AC142472.1-201ENST00000612013 1741 ntBASIC24.9■■□□□ 1.58
USP1O94782 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
USP1O94782 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
USP1O94782 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.58
USP1O94782 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.89■■□□□ 1.58
USP1O94782 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.58
USP1O94782 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
USP1O94782 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
USP1O94782 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
USP1O94782 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.88■■□□□ 1.57
USP1O94782 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
USP1O94782 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
USP1O94782 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.88■■□□□ 1.57
USP1O94782 MIR7108-201ENST00000614319 87 ntBASIC24.88■■□□□ 1.57
USP1O94782 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
USP1O94782 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
USP1O94782 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
USP1O94782 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.86■■□□□ 1.57
USP1O94782 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
USP1O94782 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
USP1O94782 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
USP1O94782 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.86■■□□□ 1.57
USP1O94782 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
USP1O94782 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
USP1O94782 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
USP1O94782 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
USP1O94782 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
USP1O94782 AC145676.1-201ENST00000514988 2004 ntBASIC24.85■■□□□ 1.57
USP1O94782 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
USP1O94782 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.85■■□□□ 1.57
USP1O94782 ZNRF2P2-203ENST00000454624 420 ntBASIC24.85■■□□□ 1.57
USP1O94782 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
USP1O94782 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.85■■□□□ 1.57
USP1O94782 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.85■■□□□ 1.57
USP1O94782 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
USP1O94782 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
USP1O94782 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
USP1O94782 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
USP1O94782 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
USP1O94782 DUX4L11-201ENST00000611504 1267 ntBASIC24.84■■□□□ 1.57
USP1O94782 DUX4L12-201ENST00000614593 1267 ntBASIC24.84■■□□□ 1.57
USP1O94782 DUX4L14-201ENST00000621227 1267 ntBASIC24.84■■□□□ 1.57
USP1O94782 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
USP1O94782 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.83■■□□□ 1.57
USP1O94782 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
USP1O94782 AC008813.1-201ENST00000536597 885 ntBASIC24.83■■□□□ 1.57
USP1O94782 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.83■■□□□ 1.57
USP1O94782 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
USP1O94782 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.82■■□□□ 1.56
USP1O94782 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
USP1O94782 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
USP1O94782 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.82■■□□□ 1.56
USP1O94782 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
USP1O94782 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
USP1O94782 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
USP1O94782 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.81■■□□□ 1.56
USP1O94782 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.81■■□□□ 1.56
USP1O94782 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
USP1O94782 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
USP1O94782 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
USP1O94782 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.8■■□□□ 1.56
USP1O94782 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
USP1O94782 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.8■■□□□ 1.56
USP1O94782 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
USP1O94782 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
USP1O94782 AC092803.2-201ENST00000564287 1899 ntBASIC24.79■■□□□ 1.56
USP1O94782 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
USP1O94782 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
USP1O94782 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.79■■□□□ 1.56
USP1O94782 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
USP1O94782 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.78■■□□□ 1.56
USP1O94782 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
USP1O94782 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.77■■□□□ 1.56
USP1O94782 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
USP1O94782 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
USP1O94782 AC148477.6-201ENST00000623746 465 ntBASIC24.77■■□□□ 1.56
USP1O94782 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.77■■□□□ 1.56
USP1O94782 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
USP1O94782 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
USP1O94782 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
USP1O94782 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
USP1O94782 DUSP8P4-201ENST00000399538 1761 ntBASIC24.76■■□□□ 1.55
USP1O94782 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
USP1O94782 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
USP1O94782 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
USP1O94782 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.75■■□□□ 1.55
USP1O94782 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.75■■□□□ 1.55
USP1O94782 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.75■■□□□ 1.55
USP1O94782 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.75■■□□□ 1.55
USP1O94782 MIR219A2-201ENST00000608502 1504 ntBASIC24.75■■□□□ 1.55
USP1O94782 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
USP1O94782 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms