Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.28■■□□□ 1.64
PRAMEF11O60813 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PRAMEF11O60813 AC022413.1-201ENST00000624602 984 ntBASIC25.28■■□□□ 1.64
PRAMEF11O60813 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PRAMEF11O60813 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PRAMEF11O60813 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
PRAMEF11O60813 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.27■■□□□ 1.64
PRAMEF11O60813 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PRAMEF11O60813 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
PRAMEF11O60813 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.26■■□□□ 1.63
PRAMEF11O60813 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
PRAMEF11O60813 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PRAMEF11O60813 GPX1-201ENST00000419349 1106 ntBASIC25.25■■□□□ 1.63
PRAMEF11O60813 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PRAMEF11O60813 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
PRAMEF11O60813 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.24■■□□□ 1.63
PRAMEF11O60813 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
PRAMEF11O60813 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PRAMEF11O60813 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.24■■□□□ 1.63
PRAMEF11O60813 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PRAMEF11O60813 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
PRAMEF11O60813 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PRAMEF11O60813 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PRAMEF11O60813 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PRAMEF11O60813 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PRAMEF11O60813 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PRAMEF11O60813 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
PRAMEF11O60813 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PRAMEF11O60813 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
PRAMEF11O60813 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PRAMEF11O60813 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.22■■□□□ 1.63
PRAMEF11O60813 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PRAMEF11O60813 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.22■■□□□ 1.63
PRAMEF11O60813 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.21■■□□□ 1.63
PRAMEF11O60813 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PRAMEF11O60813 AL157400.5-201ENST00000507624 621 ntBASIC25.21■■□□□ 1.63
PRAMEF11O60813 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.21■■□□□ 1.63
PRAMEF11O60813 AC092296.2-201ENST00000589470 999 ntBASIC25.21■■□□□ 1.63
PRAMEF11O60813 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
PRAMEF11O60813 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PRAMEF11O60813 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PRAMEF11O60813 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PRAMEF11O60813 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
PRAMEF11O60813 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.19■■□□□ 1.62
PRAMEF11O60813 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PRAMEF11O60813 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PRAMEF11O60813 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PRAMEF11O60813 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.19■■□□□ 1.62
PRAMEF11O60813 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PRAMEF11O60813 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
PRAMEF11O60813 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PRAMEF11O60813 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PRAMEF11O60813 HSD17B1P1-201ENST00000590052 955 ntBASIC25.18■■□□□ 1.62
PRAMEF11O60813 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.18■■□□□ 1.62
PRAMEF11O60813 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
PRAMEF11O60813 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
PRAMEF11O60813 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PRAMEF11O60813 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.17■■□□□ 1.62
PRAMEF11O60813 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
PRAMEF11O60813 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PRAMEF11O60813 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PRAMEF11O60813 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PRAMEF11O60813 AL121749.1-202ENST00000609313 2153 ntBASIC25.15■■□□□ 1.62
PRAMEF11O60813 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PRAMEF11O60813 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.15■■□□□ 1.62
PRAMEF11O60813 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PRAMEF11O60813 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.14■■□□□ 1.62
PRAMEF11O60813 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PRAMEF11O60813 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PRAMEF11O60813 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PRAMEF11O60813 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PRAMEF11O60813 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.13■■□□□ 1.61
PRAMEF11O60813 ECEL1P2-201ENST00000461596 1295 ntBASIC25.13■■□□□ 1.61
PRAMEF11O60813 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.13■■□□□ 1.61
PRAMEF11O60813 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PRAMEF11O60813 AL359504.2-201ENST00000605506 1601 ntBASIC25.12■■□□□ 1.61
PRAMEF11O60813 AC142472.1-201ENST00000612013 1741 ntBASIC25.12■■□□□ 1.61
PRAMEF11O60813 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PRAMEF11O60813 AP004609.3-201ENST00000610705 1884 ntBASIC25.12■■□□□ 1.61
PRAMEF11O60813 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PRAMEF11O60813 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
PRAMEF11O60813 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.12■■□□□ 1.61
PRAMEF11O60813 RNF126P1-201ENST00000567452 1320 ntBASIC25.12■■□□□ 1.61
PRAMEF11O60813 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PRAMEF11O60813 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PRAMEF11O60813 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.11■■□□□ 1.61
PRAMEF11O60813 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.1■■□□□ 1.61
PRAMEF11O60813 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PRAMEF11O60813 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PRAMEF11O60813 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
PRAMEF11O60813 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PRAMEF11O60813 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.09■■□□□ 1.61
PRAMEF11O60813 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PRAMEF11O60813 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PRAMEF11O60813 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
PRAMEF11O60813 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
PRAMEF11O60813 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
PRAMEF11O60813 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.07■■□□□ 1.6
PRAMEF11O60813 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.07■■□□□ 1.6
PRAMEF11O60813 AC025884.2-201ENST00000553429 711 ntBASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms