Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.79■■□□□ 1.24
TNFRSF11BO00300 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TNFRSF11BO00300 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
TNFRSF11BO00300 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.78■■□□□ 1.24
TNFRSF11BO00300 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
TNFRSF11BO00300 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.77■■□□□ 1.24
TNFRSF11BO00300 AC142472.1-201ENST00000612013 1741 ntBASIC22.77■■□□□ 1.24
TNFRSF11BO00300 DUX4L28-201ENST00000623687 678 ntBASIC22.77■■□□□ 1.24
TNFRSF11BO00300 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
TNFRSF11BO00300 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
TNFRSF11BO00300 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TNFRSF11BO00300 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.76■■□□□ 1.23
TNFRSF11BO00300 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
TNFRSF11BO00300 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
TNFRSF11BO00300 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TNFRSF11BO00300 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.75■■□□□ 1.23
TNFRSF11BO00300 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TNFRSF11BO00300 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TNFRSF11BO00300 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TNFRSF11BO00300 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TNFRSF11BO00300 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.73■■□□□ 1.23
TNFRSF11BO00300 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.73■■□□□ 1.23
TNFRSF11BO00300 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
TNFRSF11BO00300 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
TNFRSF11BO00300 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.72■■□□□ 1.23
TNFRSF11BO00300 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TNFRSF11BO00300 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
TNFRSF11BO00300 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TNFRSF11BO00300 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.71■■□□□ 1.23
TNFRSF11BO00300 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
TNFRSF11BO00300 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TNFRSF11BO00300 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
TNFRSF11BO00300 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.71■■□□□ 1.23
TNFRSF11BO00300 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.71■■□□□ 1.23
TNFRSF11BO00300 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TNFRSF11BO00300 AC110285.7-201ENST00000624417 1536 ntBASIC22.71■■□□□ 1.23
TNFRSF11BO00300 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TNFRSF11BO00300 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
TNFRSF11BO00300 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TNFRSF11BO00300 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TNFRSF11BO00300 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TNFRSF11BO00300 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.7■■□□□ 1.22
TNFRSF11BO00300 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TNFRSF11BO00300 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TNFRSF11BO00300 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TNFRSF11BO00300 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.69■■□□□ 1.22
TNFRSF11BO00300 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TNFRSF11BO00300 WHAMMP3-201ENST00000611636 1609 ntBASIC22.69■■□□□ 1.22
TNFRSF11BO00300 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.69■■□□□ 1.22
TNFRSF11BO00300 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNFRSF11BO00300 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
TNFRSF11BO00300 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TNFRSF11BO00300 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.68■■□□□ 1.22
TNFRSF11BO00300 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.68■■□□□ 1.22
TNFRSF11BO00300 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNFRSF11BO00300 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.68■■□□□ 1.22
TNFRSF11BO00300 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TNFRSF11BO00300 MIR3665-201ENST00000578708 105 ntBASIC22.67■■□□□ 1.22
TNFRSF11BO00300 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
TNFRSF11BO00300 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.67■■□□□ 1.22
TNFRSF11BO00300 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.66■■□□□ 1.22
TNFRSF11BO00300 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNFRSF11BO00300 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNFRSF11BO00300 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNFRSF11BO00300 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TNFRSF11BO00300 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNFRSF11BO00300 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TNFRSF11BO00300 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.65■■□□□ 1.22
TNFRSF11BO00300 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.65■■□□□ 1.22
TNFRSF11BO00300 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
TNFRSF11BO00300 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TNFRSF11BO00300 AC093323.1-202ENST00000635031 2045 ntBASIC22.65■■□□□ 1.22
TNFRSF11BO00300 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TNFRSF11BO00300 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
TNFRSF11BO00300 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
TNFRSF11BO00300 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
TNFRSF11BO00300 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TNFRSF11BO00300 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TNFRSF11BO00300 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TNFRSF11BO00300 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TNFRSF11BO00300 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.64■■□□□ 1.21
TNFRSF11BO00300 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TNFRSF11BO00300 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.64■■□□□ 1.21
TNFRSF11BO00300 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.63■■□□□ 1.21
TNFRSF11BO00300 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.63■■□□□ 1.21
TNFRSF11BO00300 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
TNFRSF11BO00300 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFRSF11BO00300 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TNFRSF11BO00300 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFRSF11BO00300 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFRSF11BO00300 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
TNFRSF11BO00300 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
TNFRSF11BO00300 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TNFRSF11BO00300 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TNFRSF11BO00300 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.62■■□□□ 1.21
TNFRSF11BO00300 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TNFRSF11BO00300 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
TNFRSF11BO00300 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TNFRSF11BO00300 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.6■■□□□ 1.21
TNFRSF11BO00300 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms