Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
TRIM6-TRIM34B2RNG4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
TRIM6-TRIM34B2RNG4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
TRIM6-TRIM34B2RNG4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TRIM6-TRIM34B2RNG4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
TRIM6-TRIM34B2RNG4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TRIM6-TRIM34B2RNG4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
TRIM6-TRIM34B2RNG4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TRIM6-TRIM34B2RNG4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
TRIM6-TRIM34B2RNG4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
TRIM6-TRIM34B2RNG4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
TRIM6-TRIM34B2RNG4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC30.23■■■□□ 2.43
TRIM6-TRIM34B2RNG4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
TRIM6-TRIM34B2RNG4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC30.23■■■□□ 2.43
TRIM6-TRIM34B2RNG4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
TRIM6-TRIM34B2RNG4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
TRIM6-TRIM34B2RNG4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
TRIM6-TRIM34B2RNG4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
TRIM6-TRIM34B2RNG4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.22■■■□□ 2.43
TRIM6-TRIM34B2RNG4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.22■■■□□ 2.43
TRIM6-TRIM34B2RNG4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
TRIM6-TRIM34B2RNG4 AP004609.3-201ENST00000610705 1884 ntBASIC30.21■■■□□ 2.43
TRIM6-TRIM34B2RNG4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.21■■■□□ 2.43
TRIM6-TRIM34B2RNG4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
TRIM6-TRIM34B2RNG4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
TRIM6-TRIM34B2RNG4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
TRIM6-TRIM34B2RNG4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.2■■■□□ 2.43
TRIM6-TRIM34B2RNG4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
TRIM6-TRIM34B2RNG4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.19■■■□□ 2.42
TRIM6-TRIM34B2RNG4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
TRIM6-TRIM34B2RNG4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
TRIM6-TRIM34B2RNG4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
TRIM6-TRIM34B2RNG4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
TRIM6-TRIM34B2RNG4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.18■■■□□ 2.42
TRIM6-TRIM34B2RNG4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
TRIM6-TRIM34B2RNG4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
TRIM6-TRIM34B2RNG4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
TRIM6-TRIM34B2RNG4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
TRIM6-TRIM34B2RNG4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
TRIM6-TRIM34B2RNG4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
TRIM6-TRIM34B2RNG4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.15■■■□□ 2.42
TRIM6-TRIM34B2RNG4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
TRIM6-TRIM34B2RNG4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
TRIM6-TRIM34B2RNG4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.15■■■□□ 2.42
TRIM6-TRIM34B2RNG4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
TRIM6-TRIM34B2RNG4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC30.14■■■□□ 2.42
TRIM6-TRIM34B2RNG4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC30.14■■■□□ 2.42
TRIM6-TRIM34B2RNG4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC30.14■■■□□ 2.42
TRIM6-TRIM34B2RNG4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
TRIM6-TRIM34B2RNG4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
TRIM6-TRIM34B2RNG4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
TRIM6-TRIM34B2RNG4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
TRIM6-TRIM34B2RNG4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC30.13■■■□□ 2.41
TRIM6-TRIM34B2RNG4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
TRIM6-TRIM34B2RNG4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
TRIM6-TRIM34B2RNG4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
TRIM6-TRIM34B2RNG4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC30.13■■■□□ 2.41
TRIM6-TRIM34B2RNG4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
TRIM6-TRIM34B2RNG4 MIR639-201ENST00000384974 98 ntBASIC30.12■■■□□ 2.41
TRIM6-TRIM34B2RNG4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
TRIM6-TRIM34B2RNG4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
TRIM6-TRIM34B2RNG4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.12■■■□□ 2.41
TRIM6-TRIM34B2RNG4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.11■■■□□ 2.41
TRIM6-TRIM34B2RNG4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
TRIM6-TRIM34B2RNG4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
TRIM6-TRIM34B2RNG4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TRIM6-TRIM34B2RNG4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.1■■■□□ 2.41
TRIM6-TRIM34B2RNG4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
TRIM6-TRIM34B2RNG4 AL359258.2-201ENST00000564063 1566 ntBASIC30.1■■■□□ 2.41
TRIM6-TRIM34B2RNG4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM6-TRIM34B2RNG4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.1■■■□□ 2.41
TRIM6-TRIM34B2RNG4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC30.1■■■□□ 2.41
TRIM6-TRIM34B2RNG4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM6-TRIM34B2RNG4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.09■■■□□ 2.41
TRIM6-TRIM34B2RNG4 AC142472.1-201ENST00000612013 1741 ntBASIC30.08■■■□□ 2.41
TRIM6-TRIM34B2RNG4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
TRIM6-TRIM34B2RNG4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC30.08■■■□□ 2.41
TRIM6-TRIM34B2RNG4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC30.08■■■□□ 2.41
TRIM6-TRIM34B2RNG4 MED25-210ENST00000612854 801 ntTSL 5 BASIC30.07■■■□□ 2.4
TRIM6-TRIM34B2RNG4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
TRIM6-TRIM34B2RNG4 MED25-214ENST00000622402 642 ntTSL 5 BASIC30.07■■■□□ 2.4
TRIM6-TRIM34B2RNG4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
TRIM6-TRIM34B2RNG4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
TRIM6-TRIM34B2RNG4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.06■■■□□ 2.4
TRIM6-TRIM34B2RNG4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
TRIM6-TRIM34B2RNG4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
TRIM6-TRIM34B2RNG4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.05■■■□□ 2.4
TRIM6-TRIM34B2RNG4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
TRIM6-TRIM34B2RNG4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
TRIM6-TRIM34B2RNG4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
TRIM6-TRIM34B2RNG4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC30.04■■■□□ 2.4
TRIM6-TRIM34B2RNG4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
TRIM6-TRIM34B2RNG4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TRIM6-TRIM34B2RNG4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TRIM6-TRIM34B2RNG4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.03■■■□□ 2.4
TRIM6-TRIM34B2RNG4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.03■■■□□ 2.4
TRIM6-TRIM34B2RNG4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
TRIM6-TRIM34B2RNG4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
TRIM6-TRIM34B2RNG4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.02■■■□□ 2.4
TRIM6-TRIM34B2RNG4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC30.01■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms