Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COLCA2A8K830 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COLCA2A8K830 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COLCA2A8K830 AC142381.3-201ENST00000568208 1670 ntBASIC19.27■□□□□ 0.68
COLCA2A8K830 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COLCA2A8K830 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.27■□□□□ 0.68
COLCA2A8K830 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
COLCA2A8K830 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.27■□□□□ 0.67
COLCA2A8K830 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COLCA2A8K830 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COLCA2A8K830 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
COLCA2A8K830 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COLCA2A8K830 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.25■□□□□ 0.67
COLCA2A8K830 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COLCA2A8K830 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.25■□□□□ 0.67
COLCA2A8K830 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
COLCA2A8K830 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COLCA2A8K830 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COLCA2A8K830 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COLCA2A8K830 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COLCA2A8K830 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COLCA2A8K830 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COLCA2A8K830 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COLCA2A8K830 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COLCA2A8K830 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COLCA2A8K830 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COLCA2A8K830 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
COLCA2A8K830 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COLCA2A8K830 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COLCA2A8K830 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COLCA2A8K830 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COLCA2A8K830 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
COLCA2A8K830 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COLCA2A8K830 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.21■□□□□ 0.67
COLCA2A8K830 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COLCA2A8K830 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COLCA2A8K830 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COLCA2A8K830 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
COLCA2A8K830 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COLCA2A8K830 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COLCA2A8K830 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COLCA2A8K830 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.2■□□□□ 0.66
COLCA2A8K830 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COLCA2A8K830 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COLCA2A8K830 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COLCA2A8K830 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
COLCA2A8K830 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COLCA2A8K830 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COLCA2A8K830 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COLCA2A8K830 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.2■□□□□ 0.66
COLCA2A8K830 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COLCA2A8K830 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COLCA2A8K830 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.19■□□□□ 0.66
COLCA2A8K830 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COLCA2A8K830 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COLCA2A8K830 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.19■□□□□ 0.66
COLCA2A8K830 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COLCA2A8K830 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
COLCA2A8K830 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COLCA2A8K830 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.18■□□□□ 0.66
COLCA2A8K830 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COLCA2A8K830 AP004833.2-201ENST00000532228 1454 ntBASIC19.17■□□□□ 0.66
COLCA2A8K830 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COLCA2A8K830 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COLCA2A8K830 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COLCA2A8K830 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COLCA2A8K830 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COLCA2A8K830 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COLCA2A8K830 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
COLCA2A8K830 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COLCA2A8K830 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COLCA2A8K830 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COLCA2A8K830 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COLCA2A8K830 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.16■□□□□ 0.66
COLCA2A8K830 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COLCA2A8K830 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COLCA2A8K830 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COLCA2A8K830 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COLCA2A8K830 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COLCA2A8K830 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.15■□□□□ 0.66
COLCA2A8K830 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COLCA2A8K830 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COLCA2A8K830 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
COLCA2A8K830 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COLCA2A8K830 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
COLCA2A8K830 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COLCA2A8K830 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COLCA2A8K830 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COLCA2A8K830 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
COLCA2A8K830 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COLCA2A8K830 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.13■□□□□ 0.65
COLCA2A8K830 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COLCA2A8K830 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
COLCA2A8K830 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COLCA2A8K830 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.12■□□□□ 0.65
COLCA2A8K830 AC138932.3-201ENST00000567634 1902 ntBASIC19.12■□□□□ 0.65
COLCA2A8K830 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.12■□□□□ 0.65
COLCA2A8K830 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.12■□□□□ 0.65
COLCA2A8K830 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COLCA2A8K830 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms