Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AC142472.1-201ENST00000612013 1741 ntBASIC17.6■□□□□ 0.41
LINC01546A6NGU7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01546A6NGU7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.59■□□□□ 0.41
LINC01546A6NGU7 LINC00543-201ENST00000567234 1845 ntBASIC17.59■□□□□ 0.41
LINC01546A6NGU7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01546A6NGU7 AC010501.1-201ENST00000606270 1962 ntBASIC17.59■□□□□ 0.41
LINC01546A6NGU7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.58■□□□□ 0.41
LINC01546A6NGU7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LINC01546A6NGU7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
LINC01546A6NGU7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01546A6NGU7 AC138932.3-201ENST00000567634 1902 ntBASIC17.58■□□□□ 0.4
LINC01546A6NGU7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01546A6NGU7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01546A6NGU7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LINC01546A6NGU7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01546A6NGU7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01546A6NGU7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LINC01546A6NGU7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01546A6NGU7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01546A6NGU7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LINC01546A6NGU7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01546A6NGU7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01546A6NGU7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01546A6NGU7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.56■□□□□ 0.4
LINC01546A6NGU7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01546A6NGU7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01546A6NGU7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01546A6NGU7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01546A6NGU7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC17.55■□□□□ 0.4
LINC01546A6NGU7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01546A6NGU7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01546A6NGU7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01546A6NGU7 AC022211.4-201ENST00000625094 2161 ntBASIC17.55■□□□□ 0.4
LINC01546A6NGU7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01546A6NGU7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01546A6NGU7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC17.55■□□□□ 0.4
LINC01546A6NGU7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LINC01546A6NGU7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LINC01546A6NGU7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC01546A6NGU7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01546A6NGU7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01546A6NGU7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC01546A6NGU7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01546A6NGU7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01546A6NGU7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01546A6NGU7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01546A6NGU7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC17.54■□□□□ 0.4
LINC01546A6NGU7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01546A6NGU7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC01546A6NGU7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LINC01546A6NGU7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LINC01546A6NGU7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01546A6NGU7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01546A6NGU7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01546A6NGU7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC17.53■□□□□ 0.4
LINC01546A6NGU7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC17.53■□□□□ 0.4
LINC01546A6NGU7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01546A6NGU7 AC135983.2-203ENST00000454486 1613 ntBASIC17.53■□□□□ 0.4
LINC01546A6NGU7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
LINC01546A6NGU7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC01546A6NGU7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01546A6NGU7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LINC01546A6NGU7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01546A6NGU7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
LINC01546A6NGU7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LINC01546A6NGU7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LINC01546A6NGU7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LINC01546A6NGU7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01546A6NGU7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01546A6NGU7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01546A6NGU7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
LINC01546A6NGU7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01546A6NGU7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.51■□□□□ 0.39
LINC01546A6NGU7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LINC01546A6NGU7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01546A6NGU7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.51■□□□□ 0.39
LINC01546A6NGU7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01546A6NGU7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01546A6NGU7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LINC01546A6NGU7 AC068473.5-201ENST00000616428 2072 ntBASIC17.51■□□□□ 0.39
LINC01546A6NGU7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.5■□□□□ 0.39
LINC01546A6NGU7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01546A6NGU7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01546A6NGU7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.5■□□□□ 0.39
LINC01546A6NGU7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.5■□□□□ 0.39
LINC01546A6NGU7 AC079834.2-201ENST00000609776 1949 ntBASIC17.5■□□□□ 0.39
LINC01546A6NGU7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01546A6NGU7 WHAMMP3-201ENST00000611636 1609 ntBASIC17.5■□□□□ 0.39
LINC01546A6NGU7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01546A6NGU7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01546A6NGU7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LINC01546A6NGU7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01546A6NGU7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.49■□□□□ 0.39
LINC01546A6NGU7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LINC01546A6NGU7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01546A6NGU7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01546A6NGU7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01546A6NGU7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01546A6NGU7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01546A6NGU7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms