Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM235A6NFC5 AC108673.1-201ENST00000510422 1159 ntBASIC21.02■□□□□ 0.96
TMEM235A6NFC5 AC005559.1-201ENST00000589661 871 ntBASIC21.02■□□□□ 0.96
TMEM235A6NFC5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM235A6NFC5 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
TMEM235A6NFC5 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM235A6NFC5 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.01■□□□□ 0.95
TMEM235A6NFC5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM235A6NFC5 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM235A6NFC5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM235A6NFC5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM235A6NFC5 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM235A6NFC5 MIR6090-201ENST00000622481 60 ntBASIC21■□□□□ 0.95
TMEM235A6NFC5 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM235A6NFC5 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM235A6NFC5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM235A6NFC5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.99■□□□□ 0.95
TMEM235A6NFC5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.99■□□□□ 0.95
TMEM235A6NFC5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM235A6NFC5 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM235A6NFC5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM235A6NFC5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM235A6NFC5 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM235A6NFC5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM235A6NFC5 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM235A6NFC5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
TMEM235A6NFC5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM235A6NFC5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM235A6NFC5 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TMEM235A6NFC5 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM235A6NFC5 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM235A6NFC5 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM235A6NFC5 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM235A6NFC5 AC142472.1-201ENST00000612013 1741 ntBASIC20.95■□□□□ 0.94
TMEM235A6NFC5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM235A6NFC5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.94■□□□□ 0.94
TMEM235A6NFC5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.94■□□□□ 0.94
TMEM235A6NFC5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM235A6NFC5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.94■□□□□ 0.94
TMEM235A6NFC5 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM235A6NFC5 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM235A6NFC5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM235A6NFC5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM235A6NFC5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.92■□□□□ 0.94
TMEM235A6NFC5 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.92■□□□□ 0.94
TMEM235A6NFC5 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM235A6NFC5 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM235A6NFC5 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TMEM235A6NFC5 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM235A6NFC5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM235A6NFC5 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM235A6NFC5 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM235A6NFC5 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM235A6NFC5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM235A6NFC5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.9■□□□□ 0.94
TMEM235A6NFC5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM235A6NFC5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM235A6NFC5 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.89■□□□□ 0.94
TMEM235A6NFC5 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TMEM235A6NFC5 SUZ12P1-203ENST00000578195 985 ntBASIC20.89■□□□□ 0.93
TMEM235A6NFC5 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.89■□□□□ 0.93
TMEM235A6NFC5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM235A6NFC5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.89■□□□□ 0.93
TMEM235A6NFC5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM235A6NFC5 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TMEM235A6NFC5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM235A6NFC5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM235A6NFC5 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM235A6NFC5 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEM235A6NFC5 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.88■□□□□ 0.93
TMEM235A6NFC5 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM235A6NFC5 ERN1-208ENST00000606895 2068 ntBASIC20.88■□□□□ 0.93
TMEM235A6NFC5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEM235A6NFC5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.88■□□□□ 0.93
TMEM235A6NFC5 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM235A6NFC5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.87■□□□□ 0.93
TMEM235A6NFC5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.87■□□□□ 0.93
TMEM235A6NFC5 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM235A6NFC5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM235A6NFC5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.86■□□□□ 0.93
TMEM235A6NFC5 WHAMMP3-201ENST00000611636 1609 ntBASIC20.86■□□□□ 0.93
TMEM235A6NFC5 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
TMEM235A6NFC5 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM235A6NFC5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM235A6NFC5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.85■□□□□ 0.93
TMEM235A6NFC5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.85■□□□□ 0.93
TMEM235A6NFC5 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TMEM235A6NFC5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM235A6NFC5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM235A6NFC5 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM235A6NFC5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TMEM235A6NFC5 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
TMEM235A6NFC5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM235A6NFC5 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TMEM235A6NFC5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM235A6NFC5 AC110285.7-201ENST00000624417 1536 ntBASIC20.83■□□□□ 0.92
TMEM235A6NFC5 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM235A6NFC5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM235A6NFC5 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM235A6NFC5 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms