Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 AC126177.7-201ENST00000547904 679 ntBASIC28.89■■■□□ 2.22
CCDC196A0A1B0GTZ2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
CCDC196A0A1B0GTZ2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
CCDC196A0A1B0GTZ2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.88■■■□□ 2.21
CCDC196A0A1B0GTZ2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CCDC196A0A1B0GTZ2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.87■■■□□ 2.21
CCDC196A0A1B0GTZ2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CCDC196A0A1B0GTZ2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.87■■■□□ 2.21
CCDC196A0A1B0GTZ2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
CCDC196A0A1B0GTZ2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CCDC196A0A1B0GTZ2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.87■■■□□ 2.21
CCDC196A0A1B0GTZ2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CCDC196A0A1B0GTZ2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CCDC196A0A1B0GTZ2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
CCDC196A0A1B0GTZ2 AL359258.2-201ENST00000564063 1566 ntBASIC28.85■■■□□ 2.21
CCDC196A0A1B0GTZ2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.85■■■□□ 2.21
CCDC196A0A1B0GTZ2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.85■■■□□ 2.21
CCDC196A0A1B0GTZ2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
CCDC196A0A1B0GTZ2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
CCDC196A0A1B0GTZ2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CCDC196A0A1B0GTZ2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
CCDC196A0A1B0GTZ2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.84■■■□□ 2.21
CCDC196A0A1B0GTZ2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CCDC196A0A1B0GTZ2 MED25-210ENST00000612854 801 ntTSL 5 BASIC28.83■■■□□ 2.21
CCDC196A0A1B0GTZ2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CCDC196A0A1B0GTZ2 MED25-214ENST00000622402 642 ntTSL 5 BASIC28.83■■■□□ 2.21
CCDC196A0A1B0GTZ2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.82■■■□□ 2.2
CCDC196A0A1B0GTZ2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CCDC196A0A1B0GTZ2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
CCDC196A0A1B0GTZ2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.81■■■□□ 2.2
CCDC196A0A1B0GTZ2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.8■■■□□ 2.2
CCDC196A0A1B0GTZ2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC28.8■■■□□ 2.2
CCDC196A0A1B0GTZ2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.8■■■□□ 2.2
CCDC196A0A1B0GTZ2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CCDC196A0A1B0GTZ2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.8■■■□□ 2.2
CCDC196A0A1B0GTZ2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.8■■■□□ 2.2
CCDC196A0A1B0GTZ2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC196A0A1B0GTZ2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC196A0A1B0GTZ2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC196A0A1B0GTZ2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC196A0A1B0GTZ2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.79■■■□□ 2.2
CCDC196A0A1B0GTZ2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
CCDC196A0A1B0GTZ2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.79■■■□□ 2.2
CCDC196A0A1B0GTZ2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC196A0A1B0GTZ2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.78■■■□□ 2.2
CCDC196A0A1B0GTZ2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CCDC196A0A1B0GTZ2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CCDC196A0A1B0GTZ2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC196A0A1B0GTZ2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC196A0A1B0GTZ2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
CCDC196A0A1B0GTZ2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
CCDC196A0A1B0GTZ2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
CCDC196A0A1B0GTZ2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CCDC196A0A1B0GTZ2 AP004609.3-201ENST00000610705 1884 ntBASIC28.76■■■□□ 2.19
CCDC196A0A1B0GTZ2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CCDC196A0A1B0GTZ2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CCDC196A0A1B0GTZ2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CCDC196A0A1B0GTZ2 AC142472.1-201ENST00000612013 1741 ntBASIC28.74■■■□□ 2.19
CCDC196A0A1B0GTZ2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.74■■■□□ 2.19
CCDC196A0A1B0GTZ2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
CCDC196A0A1B0GTZ2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CCDC196A0A1B0GTZ2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CCDC196A0A1B0GTZ2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.72■■■□□ 2.19
CCDC196A0A1B0GTZ2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CCDC196A0A1B0GTZ2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.72■■■□□ 2.19
CCDC196A0A1B0GTZ2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
CCDC196A0A1B0GTZ2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.71■■■□□ 2.19
CCDC196A0A1B0GTZ2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.71■■■□□ 2.19
CCDC196A0A1B0GTZ2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CCDC196A0A1B0GTZ2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.7■■■□□ 2.18
CCDC196A0A1B0GTZ2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.7■■■□□ 2.18
CCDC196A0A1B0GTZ2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.7■■■□□ 2.18
CCDC196A0A1B0GTZ2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CCDC196A0A1B0GTZ2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CCDC196A0A1B0GTZ2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
CCDC196A0A1B0GTZ2 AC060814.1-201ENST00000554326 538 ntBASIC28.69■■■□□ 2.18
CCDC196A0A1B0GTZ2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CCDC196A0A1B0GTZ2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.68■■■□□ 2.18
CCDC196A0A1B0GTZ2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CCDC196A0A1B0GTZ2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CCDC196A0A1B0GTZ2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.68■■■□□ 2.18
CCDC196A0A1B0GTZ2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CCDC196A0A1B0GTZ2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CCDC196A0A1B0GTZ2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CCDC196A0A1B0GTZ2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
CCDC196A0A1B0GTZ2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CCDC196A0A1B0GTZ2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC28.66■■■□□ 2.18
CCDC196A0A1B0GTZ2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CCDC196A0A1B0GTZ2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.66■■■□□ 2.18
CCDC196A0A1B0GTZ2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CCDC196A0A1B0GTZ2 AC022413.1-201ENST00000624602 984 ntBASIC28.65■■■□□ 2.18
CCDC196A0A1B0GTZ2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
CCDC196A0A1B0GTZ2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CCDC196A0A1B0GTZ2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CCDC196A0A1B0GTZ2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CCDC196A0A1B0GTZ2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CCDC196A0A1B0GTZ2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CCDC196A0A1B0GTZ2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC28.64■■■□□ 2.17
CCDC196A0A1B0GTZ2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CCDC196A0A1B0GTZ2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms