Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TRBV5-4A0A0C4DH59 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRBV5-4A0A0C4DH59 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TRBV5-4A0A0C4DH59 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.59■■□□□ 1.53
TRBV5-4A0A0C4DH59 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRBV5-4A0A0C4DH59 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.59■■□□□ 1.53
TRBV5-4A0A0C4DH59 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRBV5-4A0A0C4DH59 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRBV5-4A0A0C4DH59 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
TRBV5-4A0A0C4DH59 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
TRBV5-4A0A0C4DH59 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TRBV5-4A0A0C4DH59 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.58■■□□□ 1.53
TRBV5-4A0A0C4DH59 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.58■■□□□ 1.53
TRBV5-4A0A0C4DH59 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
TRBV5-4A0A0C4DH59 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
TRBV5-4A0A0C4DH59 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.57■■□□□ 1.52
TRBV5-4A0A0C4DH59 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TRBV5-4A0A0C4DH59 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRBV5-4A0A0C4DH59 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRBV5-4A0A0C4DH59 AL359258.2-201ENST00000564063 1566 ntBASIC24.56■■□□□ 1.52
TRBV5-4A0A0C4DH59 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TRBV5-4A0A0C4DH59 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
TRBV5-4A0A0C4DH59 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.55■■□□□ 1.52
TRBV5-4A0A0C4DH59 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRBV5-4A0A0C4DH59 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TRBV5-4A0A0C4DH59 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRBV5-4A0A0C4DH59 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.54■■□□□ 1.52
TRBV5-4A0A0C4DH59 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRBV5-4A0A0C4DH59 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.54■■□□□ 1.52
TRBV5-4A0A0C4DH59 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TRBV5-4A0A0C4DH59 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TRBV5-4A0A0C4DH59 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRBV5-4A0A0C4DH59 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
TRBV5-4A0A0C4DH59 AC126177.7-201ENST00000547904 679 ntBASIC24.52■■□□□ 1.52
TRBV5-4A0A0C4DH59 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TRBV5-4A0A0C4DH59 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.51■■□□□ 1.51
TRBV5-4A0A0C4DH59 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRBV5-4A0A0C4DH59 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRBV5-4A0A0C4DH59 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.5■■□□□ 1.51
TRBV5-4A0A0C4DH59 AC142472.1-201ENST00000612013 1741 ntBASIC24.5■■□□□ 1.51
TRBV5-4A0A0C4DH59 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRBV5-4A0A0C4DH59 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRBV5-4A0A0C4DH59 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.5■■□□□ 1.51
TRBV5-4A0A0C4DH59 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TRBV5-4A0A0C4DH59 AP004609.3-201ENST00000610705 1884 ntBASIC24.49■■□□□ 1.51
TRBV5-4A0A0C4DH59 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.49■■□□□ 1.51
TRBV5-4A0A0C4DH59 AC060814.1-201ENST00000554326 538 ntBASIC24.49■■□□□ 1.51
TRBV5-4A0A0C4DH59 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.49■■□□□ 1.51
TRBV5-4A0A0C4DH59 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRBV5-4A0A0C4DH59 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRBV5-4A0A0C4DH59 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRBV5-4A0A0C4DH59 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TRBV5-4A0A0C4DH59 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TRBV5-4A0A0C4DH59 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.48■■□□□ 1.51
TRBV5-4A0A0C4DH59 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.47■■□□□ 1.51
TRBV5-4A0A0C4DH59 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRBV5-4A0A0C4DH59 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TRBV5-4A0A0C4DH59 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRBV5-4A0A0C4DH59 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRBV5-4A0A0C4DH59 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.47■■□□□ 1.51
TRBV5-4A0A0C4DH59 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TRBV5-4A0A0C4DH59 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.47■■□□□ 1.51
TRBV5-4A0A0C4DH59 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
TRBV5-4A0A0C4DH59 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TRBV5-4A0A0C4DH59 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRBV5-4A0A0C4DH59 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
TRBV5-4A0A0C4DH59 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
TRBV5-4A0A0C4DH59 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
TRBV5-4A0A0C4DH59 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TRBV5-4A0A0C4DH59 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.45■■□□□ 1.5
TRBV5-4A0A0C4DH59 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TRBV5-4A0A0C4DH59 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TRBV5-4A0A0C4DH59 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.44■■□□□ 1.5
TRBV5-4A0A0C4DH59 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TRBV5-4A0A0C4DH59 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TRBV5-4A0A0C4DH59 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRBV5-4A0A0C4DH59 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRBV5-4A0A0C4DH59 AL157400.5-201ENST00000507624 621 ntBASIC24.43■■□□□ 1.5
TRBV5-4A0A0C4DH59 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRBV5-4A0A0C4DH59 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.43■■□□□ 1.5
TRBV5-4A0A0C4DH59 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.43■■□□□ 1.5
TRBV5-4A0A0C4DH59 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TRBV5-4A0A0C4DH59 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.42■■□□□ 1.5
TRBV5-4A0A0C4DH59 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TRBV5-4A0A0C4DH59 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRBV5-4A0A0C4DH59 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
TRBV5-4A0A0C4DH59 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRBV5-4A0A0C4DH59 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRBV5-4A0A0C4DH59 AL359504.2-201ENST00000605506 1601 ntBASIC24.4■■□□□ 1.5
TRBV5-4A0A0C4DH59 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TRBV5-4A0A0C4DH59 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRBV5-4A0A0C4DH59 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TRBV5-4A0A0C4DH59 AC092296.2-201ENST00000589470 999 ntBASIC24.4■■□□□ 1.5
TRBV5-4A0A0C4DH59 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TRBV5-4A0A0C4DH59 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
TRBV5-4A0A0C4DH59 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TRBV5-4A0A0C4DH59 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
TRBV5-4A0A0C4DH59 AC022413.1-201ENST00000624602 984 ntBASIC24.39■■□□□ 1.49
TRBV5-4A0A0C4DH59 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
TRBV5-4A0A0C4DH59 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms