Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV34A0A0B4J273 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TRAV34A0A0B4J273 DUSP8P4-201ENST00000399538 1761 ntBASIC18.93■□□□□ 0.62
TRAV34A0A0B4J273 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
TRAV34A0A0B4J273 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV34A0A0B4J273 AC093323.1-202ENST00000635031 2045 ntBASIC18.93■□□□□ 0.62
TRAV34A0A0B4J273 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TRAV34A0A0B4J273 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV34A0A0B4J273 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV34A0A0B4J273 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRAV34A0A0B4J273 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV34A0A0B4J273 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV34A0A0B4J273 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV34A0A0B4J273 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TRAV34A0A0B4J273 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.91■□□□□ 0.62
TRAV34A0A0B4J273 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV34A0A0B4J273 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV34A0A0B4J273 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAV34A0A0B4J273 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV34A0A0B4J273 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
TRAV34A0A0B4J273 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV34A0A0B4J273 AL391121.1-201ENST00000607967 1349 ntBASIC18.9■□□□□ 0.62
TRAV34A0A0B4J273 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV34A0A0B4J273 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV34A0A0B4J273 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRAV34A0A0B4J273 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAV34A0A0B4J273 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV34A0A0B4J273 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAV34A0A0B4J273 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAV34A0A0B4J273 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV34A0A0B4J273 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV34A0A0B4J273 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV34A0A0B4J273 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV34A0A0B4J273 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV34A0A0B4J273 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV34A0A0B4J273 AC135983.2-203ENST00000454486 1613 ntBASIC18.88■□□□□ 0.61
TRAV34A0A0B4J273 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAV34A0A0B4J273 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV34A0A0B4J273 AP004609.3-201ENST00000610705 1884 ntBASIC18.87■□□□□ 0.61
TRAV34A0A0B4J273 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV34A0A0B4J273 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV34A0A0B4J273 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV34A0A0B4J273 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV34A0A0B4J273 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV34A0A0B4J273 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV34A0A0B4J273 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
TRAV34A0A0B4J273 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV34A0A0B4J273 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV34A0A0B4J273 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV34A0A0B4J273 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV34A0A0B4J273 WHAMMP2-203ENST00000563942 1603 ntBASIC18.85■□□□□ 0.61
TRAV34A0A0B4J273 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV34A0A0B4J273 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TRAV34A0A0B4J273 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRAV34A0A0B4J273 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV34A0A0B4J273 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV34A0A0B4J273 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV34A0A0B4J273 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
TRAV34A0A0B4J273 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
TRAV34A0A0B4J273 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV34A0A0B4J273 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
TRAV34A0A0B4J273 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV34A0A0B4J273 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV34A0A0B4J273 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV34A0A0B4J273 CAHM-201ENST00000604200 896 ntBASIC18.83■□□□□ 0.6
TRAV34A0A0B4J273 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.83■□□□□ 0.6
TRAV34A0A0B4J273 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TRAV34A0A0B4J273 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV34A0A0B4J273 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV34A0A0B4J273 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV34A0A0B4J273 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV34A0A0B4J273 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV34A0A0B4J273 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV34A0A0B4J273 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRAV34A0A0B4J273 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRAV34A0A0B4J273 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV34A0A0B4J273 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV34A0A0B4J273 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV34A0A0B4J273 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.82■□□□□ 0.6
TRAV34A0A0B4J273 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV34A0A0B4J273 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV34A0A0B4J273 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV34A0A0B4J273 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV34A0A0B4J273 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV34A0A0B4J273 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV34A0A0B4J273 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TRAV34A0A0B4J273 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV34A0A0B4J273 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV34A0A0B4J273 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV34A0A0B4J273 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV34A0A0B4J273 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV34A0A0B4J273 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV34A0A0B4J273 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV34A0A0B4J273 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV34A0A0B4J273 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV34A0A0B4J273 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV34A0A0B4J273 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV34A0A0B4J273 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV34A0A0B4J273 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV34A0A0B4J273 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms