Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 AC233702.3-201ENST00000578656 1387 ntBASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TSSC4Q9Y5U2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 AC009102.3-201ENST00000623118 1491 ntBASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 TSPY19P-201ENST00000418461 509 ntBASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 TSPY18P-201ENST00000441642 509 ntBASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 FOSL1P1-201ENST00000511041 816 ntBASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 AC011840.4-201ENST00000578471 627 ntBASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TSSC4Q9Y5U2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 AC005332.7-201ENST00000614046 2005 ntBASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 AL845331.1-201ENST00000424978 1190 ntBASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 KRT17P6-201ENST00000453795 1220 ntBASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 IFNL4P1-201ENST00000607083 540 ntBASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.17□□□□□ -0.14
TSSC4Q9Y5U2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms