Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHAC2Q9Y5I4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 RPSAP43-201ENST00000402237 625 ntBASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 AC105339.3-201ENST00000560043 636 ntBASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHAC2Q9Y5I4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 AC112482.1-201ENST00000492080 688 ntBASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHAC2Q9Y5I4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 YBX2P1-201ENST00000394192 760 ntBASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 FAM220CP-201ENST00000395253 831 ntBASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 UPF3AP3-201ENST00000420996 769 ntBASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 GPX1P2-201ENST00000429271 606 ntBASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 KRT8P47-201ENST00000604727 1398 ntBASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHAC2Q9Y5I4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHAC2Q9Y5I4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
PCDHAC2Q9Y5I4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHAC2Q9Y5I4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHAC2Q9Y5I4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDHAC2Q9Y5I4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDHAC2Q9Y5I4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHAC2Q9Y5I4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHAC2Q9Y5I4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHAC2Q9Y5I4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms