Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP2BQ9UQN3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 AP003071.4-201ENST00000562276 1284 ntBASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2BQ9UQN3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHMP2BQ9UQN3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CHMP2BQ9UQN3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 Z99916.2-201ENST00000604037 246 ntBASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 KRT8P7-201ENST00000533003 1432 ntBASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2BQ9UQN3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 RBM17P1-201ENST00000453646 1190 ntBASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 AL353719.1-201ENST00000566847 864 ntBASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 WWOX-216ENST00000569818 525 ntBASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2BQ9UQN3 AL024508.2-201ENST00000607749 1894 ntBASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 PP12613-201ENST00000424958 2230 ntBASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms