Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 Z69720.1-201ENST00000601483 472 ntBASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 AL353801.3-201ENST00000609898 542 ntBASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 BX640515.1-201ENST00000617215 977 ntBASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC23.35■■□□□ 1.33
PDZRN3Q9UPQ7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 AC020763.4-201ENST00000623414 4170 ntBASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 HOXB1-202ENST00000577092 1414 ntBASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 LETM1P2-201ENST00000597330 2178 ntBASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 Z83836.1-201ENST00000624605 1642 ntBASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 AL357033.4-201ENST00000617703 1807 ntBASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 ABALON-201ENST00000629058 1903 ntBASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 PENK-208ENST00000523051 772 ntTSL 5 BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 AC104390.1-201ENST00000555663 520 ntBASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDZRN3Q9UPQ7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 IGHV3-41-201ENST00000613121 348 ntBASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PDZRN3Q9UPQ7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.32
PDZRN3Q9UPQ7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PDZRN3Q9UPQ7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PDZRN3Q9UPQ7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
PDZRN3Q9UPQ7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC23.33■■□□□ 1.32
PDZRN3Q9UPQ7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.33■■□□□ 1.32
PDZRN3Q9UPQ7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC23.33■■□□□ 1.32
PDZRN3Q9UPQ7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 AC233702.3-201ENST00000578656 1387 ntBASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 AC005332.3-201ENST00000589904 676 ntBASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 AC064862.7-201ENST00000604520 867 ntBASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 AL390719.2-201ENST00000606993 987 ntBASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms