Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 COX5BP2-201ENST00000392354 334 ntBASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 AL139288.1-201ENST00000623748 933 ntBASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 AC093503.3-201ENST00000624917 2352 ntBASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPO2Q9UMS6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.77■□□□□ 0.92
SYNPO2Q9UMS6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNPO2Q9UMS6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SYNPO2Q9UMS6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SYNPO2Q9UMS6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SYNPO2Q9UMS6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNPO2Q9UMS6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNPO2Q9UMS6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.77■□□□□ 0.92
SYNPO2Q9UMS6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SYNPO2Q9UMS6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNPO2Q9UMS6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNPO2Q9UMS6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNPO2Q9UMS6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNPO2Q9UMS6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNPO2Q9UMS6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.77■□□□□ 0.92
SYNPO2Q9UMS6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SYNPO2Q9UMS6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.77■□□□□ 0.92
SYNPO2Q9UMS6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.77■□□□□ 0.92
SYNPO2Q9UMS6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SYNPO2Q9UMS6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.77■□□□□ 0.91
SYNPO2Q9UMS6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.77■□□□□ 0.91
SYNPO2Q9UMS6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SYNPO2Q9UMS6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.77■□□□□ 0.91
SYNPO2Q9UMS6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SYNPO2Q9UMS6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.77■□□□□ 0.91
SYNPO2Q9UMS6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
SYNPO2Q9UMS6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SYNPO2Q9UMS6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 AC103564.2-201ENST00000432853 1299 ntBASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 AP001005.1-201ENST00000571755 1248 ntBASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 AC010460.3-201ENST00000511359 1579 ntBASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SYNPO2Q9UMS6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 AC073648.2-201ENST00000510116 352 ntBASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 BX640515.1-201ENST00000617215 977 ntBASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 AD001527.2-201ENST00000622994 785 ntBASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 AC073592.4-201ENST00000623827 446 ntBASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNPO2Q9UMS6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms