Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC22.07■■□□□ 1.12
ECHDC1Q9NTX5 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ECHDC1Q9NTX5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ECHDC1Q9NTX5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ECHDC1Q9NTX5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 TSPY12P-201ENST00000421279 868 ntBASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 AC009154.2-201ENST00000621177 724 ntBASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ECHDC1Q9NTX5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 IER3-202ENST00000376377 1350 ntBASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 AL358472.4-201ENST00000633140 710 ntBASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
ECHDC1Q9NTX5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 KRT8P26-201ENST00000534154 1276 ntBASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 AP000550.4-202ENST00000639755 178 ntBASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
ECHDC1Q9NTX5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC22.03■■□□□ 1.12
ECHDC1Q9NTX5 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ECHDC1Q9NTX5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ECHDC1Q9NTX5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
ECHDC1Q9NTX5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC22.03■■□□□ 1.12
ECHDC1Q9NTX5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ECHDC1Q9NTX5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ECHDC1Q9NTX5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ECHDC1Q9NTX5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC22.03■■□□□ 1.12
ECHDC1Q9NTX5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
ECHDC1Q9NTX5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ECHDC1Q9NTX5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
ECHDC1Q9NTX5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC22.03■■□□□ 1.12
ECHDC1Q9NTX5 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
ECHDC1Q9NTX5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC22.03■■□□□ 1.12
ECHDC1Q9NTX5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ECHDC1Q9NTX5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC22.03■■□□□ 1.12
ECHDC1Q9NTX5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC22.03■■□□□ 1.12
ECHDC1Q9NTX5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ECHDC1Q9NTX5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms