Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 MINOS1P3-201ENST00000457048 203 ntBASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 AL121772.3-201ENST00000610840 674 ntBASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 KRT8P47-201ENST00000604727 1398 ntBASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CSNK1G1Q9HCP0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 AC009533.2-201ENST00000543664 586 ntBASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 ABALON-201ENST00000629058 1903 ntBASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CSNK1G1Q9HCP0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 AC096633.1-201ENST00000422446 749 ntBASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 KRT18P31-201ENST00000506277 1292 ntBASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.87■□□□□ 0.61
CSNK1G1Q9HCP0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 FLJ13224-201ENST00000313737 1514 ntBASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 KRT16P4-201ENST00000453883 522 ntBASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 AC138894.3-201ENST00000603787 634 ntBASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSNK1G1Q9HCP0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms