Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.51■□□□□ 0.71
NXF3Q9H4D5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 AC132008.2-207ENST00000454517 770 ntBASIC19.5■□□□□ 0.71
NXF3Q9H4D5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 AC009533.2-201ENST00000543664 586 ntBASIC19.5■□□□□ 0.71
NXF3Q9H4D5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 TP73-AS1-207ENST00000624167 988 ntBASIC19.5■□□□□ 0.71
NXF3Q9H4D5 AC004408.2-201ENST00000623613 2777 ntBASIC19.5■□□□□ 0.71
NXF3Q9H4D5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.5■□□□□ 0.71
NXF3Q9H4D5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 MRPL3P1-201ENST00000400109 1033 ntBASIC19.49■□□□□ 0.71
NXF3Q9H4D5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NXF3Q9H4D5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 SLC25A6P4-201ENST00000586535 553 ntBASIC19.48■□□□□ 0.71
NXF3Q9H4D5 AC011467.2-201ENST00000598425 242 ntBASIC19.48■□□□□ 0.71
NXF3Q9H4D5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms