Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 AC010331.1-201ENST00000611423 582 ntBASIC16.18■□□□□ 0.18
NELFAQ9H3P2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NELFAQ9H3P2 LTB4R2-202ENST00000528054 3092 ntBASIC16.17■□□□□ 0.18
NELFAQ9H3P2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 MIR1224-201ENST00000408193 85 ntBASIC16.17■□□□□ 0.18
NELFAQ9H3P2 AC092647.4-201ENST00000457211 535 ntBASIC16.17■□□□□ 0.18
NELFAQ9H3P2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 NTF6B-201ENST00000591913 560 ntBASIC16.17■□□□□ 0.18
NELFAQ9H3P2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 HYMAI.1-201ENST00000620949 238 ntBASIC16.17■□□□□ 0.18
NELFAQ9H3P2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NELFAQ9H3P2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.16■□□□□ 0.18
NELFAQ9H3P2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 AC034232.1-201ENST00000506026 1064 ntBASIC16.16■□□□□ 0.18
NELFAQ9H3P2 AC079602.3-201ENST00000623931 403 ntBASIC16.16■□□□□ 0.18
NELFAQ9H3P2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NELFAQ9H3P2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms