Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 PCED1CP-201ENST00000419887 785 ntBASIC16.81■□□□□ 0.28
UBQLN3Q9H347 HLA-F-220ENST00000434407 884 ntBASIC16.81■□□□□ 0.28
UBQLN3Q9H347 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 AC116407.4-201ENST00000623319 1061 ntBASIC16.81■□□□□ 0.28
UBQLN3Q9H347 AC079602.3-201ENST00000623931 403 ntBASIC16.81■□□□□ 0.28
UBQLN3Q9H347 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 AP000997.3-201ENST00000623333 2250 ntBASIC16.81■□□□□ 0.28
UBQLN3Q9H347 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.81■□□□□ 0.28
UBQLN3Q9H347 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 KRT8P50-201ENST00000562022 1438 ntBASIC16.8■□□□□ 0.28
UBQLN3Q9H347 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 VENTXP5-201ENST00000523979 775 ntBASIC16.8■□□□□ 0.28
UBQLN3Q9H347 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
UBQLN3Q9H347 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 AP000593.1-201ENST00000393668 712 ntBASIC16.79■□□□□ 0.28
UBQLN3Q9H347 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
UBQLN3Q9H347 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms