Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CDT1Q9H211 MINOS1P3-201ENST00000457048 203 ntBASIC19.58■□□□□ 0.72
CDT1Q9H211 UNC93B7-201ENST00000509439 705 ntBASIC19.58■□□□□ 0.72
CDT1Q9H211 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.58■□□□□ 0.72
CDT1Q9H211 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.58■□□□□ 0.72
CDT1Q9H211 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.58■□□□□ 0.72
CDT1Q9H211 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDT1Q9H211 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CDT1Q9H211 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDT1Q9H211 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.58■□□□□ 0.72
CDT1Q9H211 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDT1Q9H211 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CDT1Q9H211 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.58■□□□□ 0.72
CDT1Q9H211 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDT1Q9H211 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDT1Q9H211 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDT1Q9H211 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDT1Q9H211 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDT1Q9H211 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDT1Q9H211 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDT1Q9H211 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDT1Q9H211 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.57■□□□□ 0.72
CDT1Q9H211 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.57■□□□□ 0.72
CDT1Q9H211 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDT1Q9H211 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDT1Q9H211 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CDT1Q9H211 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
CDT1Q9H211 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDT1Q9H211 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDT1Q9H211 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDT1Q9H211 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDT1Q9H211 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDT1Q9H211 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.57■□□□□ 0.72
CDT1Q9H211 DUTP2-201ENST00000519164 463 ntBASIC19.57■□□□□ 0.72
CDT1Q9H211 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CDT1Q9H211 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.57■□□□□ 0.72
CDT1Q9H211 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.57■□□□□ 0.72
CDT1Q9H211 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.57■□□□□ 0.72
CDT1Q9H211 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDT1Q9H211 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDT1Q9H211 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDT1Q9H211 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDT1Q9H211 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDT1Q9H211 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDT1Q9H211 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.57■□□□□ 0.72
CDT1Q9H211 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDT1Q9H211 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.57■□□□□ 0.72
CDT1Q9H211 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDT1Q9H211 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CDT1Q9H211 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CDT1Q9H211 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CDT1Q9H211 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.56■□□□□ 0.72
CDT1Q9H211 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDT1Q9H211 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDT1Q9H211 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDT1Q9H211 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.56■□□□□ 0.72
CDT1Q9H211 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDT1Q9H211 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDT1Q9H211 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDT1Q9H211 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CDT1Q9H211 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CDT1Q9H211 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDT1Q9H211 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.56■□□□□ 0.72
CDT1Q9H211 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.56■□□□□ 0.72
CDT1Q9H211 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.56■□□□□ 0.72
CDT1Q9H211 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.56■□□□□ 0.72
CDT1Q9H211 AL121894.2-201ENST00000602977 491 ntBASIC19.56■□□□□ 0.72
CDT1Q9H211 AL138831.2-201ENST00000606564 490 ntBASIC19.56■□□□□ 0.72
CDT1Q9H211 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDT1Q9H211 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CDT1Q9H211 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDT1Q9H211 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDT1Q9H211 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.56■□□□□ 0.72
CDT1Q9H211 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDT1Q9H211 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDT1Q9H211 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDT1Q9H211 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDT1Q9H211 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDT1Q9H211 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDT1Q9H211 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDT1Q9H211 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDT1Q9H211 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDT1Q9H211 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDT1Q9H211 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CDT1Q9H211 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.55■□□□□ 0.72
CDT1Q9H211 NUS1P2-201ENST00000417358 873 ntBASIC19.55■□□□□ 0.72
CDT1Q9H211 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.55■□□□□ 0.72
CDT1Q9H211 KRT18P31-201ENST00000506277 1292 ntBASIC19.55■□□□□ 0.72
CDT1Q9H211 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.55■□□□□ 0.72
CDT1Q9H211 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.55■□□□□ 0.72
CDT1Q9H211 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.55■□□□□ 0.72
CDT1Q9H211 AL121772.3-201ENST00000610840 674 ntBASIC19.55■□□□□ 0.72
CDT1Q9H211 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.55■□□□□ 0.72
CDT1Q9H211 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CDT1Q9H211 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CDT1Q9H211 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDT1Q9H211 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.55■□□□□ 0.72
CDT1Q9H211 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.55■□□□□ 0.72
CDT1Q9H211 REXO1L9P-201ENST00000604264 2108 ntBASIC19.55■□□□□ 0.72
CDT1Q9H211 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms