Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX47Q9H0S4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX47Q9H0S4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX47Q9H0S4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX47Q9H0S4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
DDX47Q9H0S4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
DDX47Q9H0S4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
DDX47Q9H0S4 AL023806.1-201ENST00000603994 1649 ntBASIC18.89■□□□□ 0.62
DDX47Q9H0S4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX47Q9H0S4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 ID1-201ENST00000376105 1233 ntBASIC18.88■□□□□ 0.61
DDX47Q9H0S4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.88■□□□□ 0.61
DDX47Q9H0S4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.87■□□□□ 0.61
DDX47Q9H0S4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX47Q9H0S4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDX47Q9H0S4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.86■□□□□ 0.61
DDX47Q9H0S4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.86■□□□□ 0.61
DDX47Q9H0S4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.86■□□□□ 0.61
DDX47Q9H0S4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX47Q9H0S4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX47Q9H0S4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.86■□□□□ 0.61
DDX47Q9H0S4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.86■□□□□ 0.61
DDX47Q9H0S4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
DDX47Q9H0S4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.86■□□□□ 0.61
DDX47Q9H0S4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms