Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 MIR3687-1-201ENST00000614492 61 ntBASIC23.4■■□□□ 1.34
PCDH11XQ9BZA7 MIR1199-201ENST00000621445 119 ntBASIC23.4■■□□□ 1.34
PCDH11XQ9BZA7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC23.4■■□□□ 1.34
PCDH11XQ9BZA7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC23.4■■□□□ 1.34
PCDH11XQ9BZA7 SIGLEC16-201ENST00000599858 1437 ntBASIC23.4■■□□□ 1.34
PCDH11XQ9BZA7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDH11XQ9BZA7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDH11XQ9BZA7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDH11XQ9BZA7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC23.4■■□□□ 1.34
PCDH11XQ9BZA7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
PCDH11XQ9BZA7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC23.4■■□□□ 1.34
PCDH11XQ9BZA7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC23.4■■□□□ 1.34
PCDH11XQ9BZA7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDH11XQ9BZA7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC23.4■■□□□ 1.34
PCDH11XQ9BZA7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PCDH11XQ9BZA7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PCDH11XQ9BZA7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
PCDH11XQ9BZA7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PCDH11XQ9BZA7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC23.39■■□□□ 1.34
PCDH11XQ9BZA7 AC073621.1-201ENST00000392730 636 ntBASIC23.39■■□□□ 1.34
PCDH11XQ9BZA7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC23.39■■□□□ 1.34
PCDH11XQ9BZA7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC23.39■■□□□ 1.34
PCDH11XQ9BZA7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC23.39■■□□□ 1.34
PCDH11XQ9BZA7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC23.39■■□□□ 1.34
PCDH11XQ9BZA7 AC112482.1-201ENST00000492080 688 ntBASIC23.39■■□□□ 1.34
PCDH11XQ9BZA7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PCDH11XQ9BZA7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
PCDH11XQ9BZA7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC23.39■■□□□ 1.34
PCDH11XQ9BZA7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PCDH11XQ9BZA7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PCDH11XQ9BZA7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDH11XQ9BZA7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDH11XQ9BZA7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDH11XQ9BZA7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDH11XQ9BZA7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDH11XQ9BZA7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDH11XQ9BZA7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 PGM5P2-202ENST00000637225 1043 ntBASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH11XQ9BZA7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 SPDYE21P-201ENST00000413323 827 ntBASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 PMS2P2-201ENST00000425039 1128 ntBASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 ESPNP-201ENST00000270691 2015 ntBASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH11XQ9BZA7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH11XQ9BZA7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH11XQ9BZA7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDH11XQ9BZA7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
PCDH11XQ9BZA7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC23.36■■□□□ 1.33
PCDH11XQ9BZA7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH11XQ9BZA7 AC064836.3-201ENST00000607928 673 ntBASIC23.36■■□□□ 1.33
PCDH11XQ9BZA7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
PCDH11XQ9BZA7 AC005593.1-201ENST00000624894 515 ntBASIC23.36■■□□□ 1.33
PCDH11XQ9BZA7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
PCDH11XQ9BZA7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH11XQ9BZA7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH11XQ9BZA7 KRT8P47-201ENST00000604727 1398 ntBASIC23.36■■□□□ 1.33
PCDH11XQ9BZA7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDH11XQ9BZA7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH11XQ9BZA7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms