Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 AK4P3-201ENST00000418260 669 ntBASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 RNF152P1-201ENST00000397754 604 ntBASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 MIR3180-4-201ENST00000582223 153 ntBASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
NUDCD1Q96RS6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 TSPY5P-201ENST00000426936 936 ntBASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 AC010240.3-201ENST00000607688 395 ntBASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
NUDCD1Q96RS6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUDCD1Q96RS6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NUDCD1Q96RS6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUDCD1Q96RS6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.73■□□□□ 0.59
NUDCD1Q96RS6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.73■□□□□ 0.59
NUDCD1Q96RS6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
NUDCD1Q96RS6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NUDCD1Q96RS6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NUDCD1Q96RS6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.73■□□□□ 0.59
NUDCD1Q96RS6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NUDCD1Q96RS6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUDCD1Q96RS6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NUDCD1Q96RS6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms