Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 Z69720.1-201ENST00000601483 472 ntBASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.09■□□□□ 0.49
ECHDC3Q96DC8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ECHDC3Q96DC8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ECHDC3Q96DC8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ECHDC3Q96DC8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
ECHDC3Q96DC8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.08■□□□□ 0.49
ECHDC3Q96DC8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ECHDC3Q96DC8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ECHDC3Q96DC8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ECHDC3Q96DC8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
ECHDC3Q96DC8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ECHDC3Q96DC8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ECHDC3Q96DC8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ECHDC3Q96DC8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ECHDC3Q96DC8 KRT17P6-201ENST00000453795 1220 ntBASIC18.08■□□□□ 0.48
ECHDC3Q96DC8 VENTXP7-201ENST00000475503 772 ntBASIC18.08■□□□□ 0.48
ECHDC3Q96DC8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ECHDC3Q96DC8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.08■□□□□ 0.48
ECHDC3Q96DC8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.08■□□□□ 0.48
ECHDC3Q96DC8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ECHDC3Q96DC8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ECHDC3Q96DC8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.08■□□□□ 0.48
ECHDC3Q96DC8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ECHDC3Q96DC8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ECHDC3Q96DC8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
ECHDC3Q96DC8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ECHDC3Q96DC8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ECHDC3Q96DC8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ECHDC3Q96DC8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ECHDC3Q96DC8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ECHDC3Q96DC8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 REXO1L9P-201ENST00000604264 2108 ntBASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 NUS1P1-201ENST00000446295 882 ntBASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 AP000867.3-201ENST00000524675 377 ntBASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 MIR3652-201ENST00000579335 131 ntBASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 AC005336.2-201ENST00000593183 939 ntBASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 CLEC4GP1-201ENST00000596555 870 ntBASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ECHDC3Q96DC8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.06■□□□□ 0.48
ECHDC3Q96DC8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ECHDC3Q96DC8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.06■□□□□ 0.48
ECHDC3Q96DC8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ECHDC3Q96DC8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ECHDC3Q96DC8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ECHDC3Q96DC8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ECHDC3Q96DC8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ECHDC3Q96DC8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ECHDC3Q96DC8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ECHDC3Q96DC8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
ECHDC3Q96DC8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ECHDC3Q96DC8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ECHDC3Q96DC8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ECHDC3Q96DC8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.06■□□□□ 0.48
ECHDC3Q96DC8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.06■□□□□ 0.48
ECHDC3Q96DC8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms