Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 AC011298.2-201ENST00000617989 482 ntBASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAB40AQ8WXH6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.96■□□□□ 0.14
RAB40AQ8WXH6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RAB40AQ8WXH6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RAB40AQ8WXH6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAB40AQ8WXH6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.96■□□□□ 0.14
RAB40AQ8WXH6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.96■□□□□ 0.14
RAB40AQ8WXH6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.96■□□□□ 0.14
RAB40AQ8WXH6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAB40AQ8WXH6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 PCDHA12-202ENST00000613593 2588 ntBASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 AP005242.2-201ENST00000580065 1175 ntBASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 MYLKP1-201ENST00000509077 1580 ntBASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB40AQ8WXH6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 AC108860.2-201ENST00000562760 2183 ntBASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 KRT8P3-201ENST00000519669 1449 ntBASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 KRT8P9-201ENST00000558927 1449 ntBASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 CRYGFP-201ENST00000418459 633 ntBASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 FAM207BP-201ENST00000447172 505 ntBASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 SLC25A1P4-201ENST00000567977 778 ntBASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 AC141586.5-201ENST00000624546 2050 ntBASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.94■□□□□ 0.14
RAB40AQ8WXH6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB40AQ8WXH6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.93■□□□□ 0.14
RAB40AQ8WXH6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.93■□□□□ 0.14
RAB40AQ8WXH6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RAB40AQ8WXH6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RAB40AQ8WXH6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.93■□□□□ 0.14
RAB40AQ8WXH6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms