Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ATRIPQ8WXE1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATRIPQ8WXE1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.98■□□□□ 0.79
ATRIPQ8WXE1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.98■□□□□ 0.79
ATRIPQ8WXE1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.98■□□□□ 0.79
ATRIPQ8WXE1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ATRIPQ8WXE1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.98■□□□□ 0.79
ATRIPQ8WXE1 AP005242.2-201ENST00000580065 1175 ntBASIC19.98■□□□□ 0.79
ATRIPQ8WXE1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.98■□□□□ 0.79
ATRIPQ8WXE1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.98■□□□□ 0.79
ATRIPQ8WXE1 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.98■□□□□ 0.79
ATRIPQ8WXE1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.98■□□□□ 0.79
ATRIPQ8WXE1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.98■□□□□ 0.79
ATRIPQ8WXE1 AC008556.1-201ENST00000610908 2040 ntBASIC19.98■□□□□ 0.79
ATRIPQ8WXE1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.98■□□□□ 0.79
ATRIPQ8WXE1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.98■□□□□ 0.79
ATRIPQ8WXE1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.98■□□□□ 0.79
ATRIPQ8WXE1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATRIPQ8WXE1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATRIPQ8WXE1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 AL645608.8-201ENST00000606034 2086 ntBASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
ATRIPQ8WXE1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ATRIPQ8WXE1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
ATRIPQ8WXE1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ATRIPQ8WXE1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.96■□□□□ 0.79
ATRIPQ8WXE1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATRIPQ8WXE1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATRIPQ8WXE1 CRYGFP-201ENST00000418459 633 ntBASIC19.96■□□□□ 0.79
ATRIPQ8WXE1 AC026396.1-201ENST00000419388 421 ntBASIC19.96■□□□□ 0.79
ATRIPQ8WXE1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.96■□□□□ 0.79
ATRIPQ8WXE1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.96■□□□□ 0.79
ATRIPQ8WXE1 AP000550.4-202ENST00000639755 178 ntBASIC19.96■□□□□ 0.79
ATRIPQ8WXE1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATRIPQ8WXE1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATRIPQ8WXE1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATRIPQ8WXE1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.96■□□□□ 0.79
ATRIPQ8WXE1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.96■□□□□ 0.79
ATRIPQ8WXE1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.96■□□□□ 0.79
ATRIPQ8WXE1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATRIPQ8WXE1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.95■□□□□ 0.79
ATRIPQ8WXE1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 GNAS-203ENST00000306120 1878 ntBASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 RNF152P1-201ENST00000397754 604 ntBASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 AC009947.2-201ENST00000444014 672 ntBASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATRIPQ8WXE1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms