Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TMC1Q8TDI8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
TMC1Q8TDI8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 AC073592.3-201ENST00000625118 1834 ntBASIC25.19■■□□□ 1.62
TMC1Q8TDI8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC25.19■■□□□ 1.62
TMC1Q8TDI8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 IGHV3-47-201ENST00000425060 335 ntBASIC25.18■■□□□ 1.62
TMC1Q8TDI8 EMBP1-201ENST00000458200 901 ntBASIC25.18■■□□□ 1.62
TMC1Q8TDI8 KRT18P31-201ENST00000506277 1292 ntBASIC25.18■■□□□ 1.62
TMC1Q8TDI8 AC011840.4-201ENST00000578471 627 ntBASIC25.18■■□□□ 1.62
TMC1Q8TDI8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TMC1Q8TDI8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 LINC01126-201ENST00000623515 1646 ntBASIC25.17■■□□□ 1.62
TMC1Q8TDI8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 AC004870.1-201ENST00000315132 882 ntBASIC25.17■■□□□ 1.62
TMC1Q8TDI8 AC246785.2-201ENST00000432512 513 ntBASIC25.17■■□□□ 1.62
TMC1Q8TDI8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TMC1Q8TDI8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 NSUN5P1-202ENST00000421140 1535 ntBASIC25.16■■□□□ 1.62
TMC1Q8TDI8 NSUN5P2-203ENST00000457352 1529 ntBASIC25.16■■□□□ 1.62
TMC1Q8TDI8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
TMC1Q8TDI8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC25.16■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms